Click here to switch to the map view.

The map label for this gene is 52142417

Identifier: 52142417

GI number: 52142417

Start: 2938635

End: 2939270

Strand: Direct

Name: 52142417

Synonym: BCZK2824

Alternate gene names: NA

Gene position: 2938635-2939270 (Clockwise)

Preceding gene: 52142426

Following gene: 52142416

Centisome position: 55.44

GC content: 34.75

Gene sequence:

>636_bases
ATGAAGGAGGGACATGCTTTGCGCGATAGTAATTTAGATTTACGTGTTGTTCGTACGAAAACTGCCATACGAAATGCATT
GGTGGAATTAATTGAAGAAAAAGGTTTTGACGCCATTACAGTGAAAGATATTACAACGAAAGCAAACATTAATCGCGGTA
CTTTCTATGCGCACTATCAAGATAAATTTGATTTAATGACAAAATGCCAAGAAGACATTATGTATGAGTTTTCTAGCATT
GCAAAAAAGAGATTCCCAGAAGTGATTGCGGATCTCGGATCGAATCCTTCTCCAACAATGCCGTTTCTACTTATCACTTC
TATTCTTGAATTTCTAAATGAAAATAGTGATTTTATGAAAGCTGTATTAAGCCCAAAAGGAGATTTATCTTTTCAAACAA
AGTTGAAAGACTTTATGTGGAAAACATTATTTGAAGATACGAATGGTGCTCTCATTAATAAGGAAAATTTACTTGTTCCA
AGCCAATATTTAGCTTCTTATATGGCATCTGCTCATATTGGTGTCATTCAGCAATGGTTAAATAGTGGCCAAAAAGAAAC
ACCAGAGGAAATTGCTCGTATTTTATCAACAATCGCAGTTCATGGACCTTTTTATGCAGCTGGGTTAAAAAAGTGA

Upstream 100 bases:

>100_bases
ATTTATAATAACCAACAACATGTTGTTTATTTATATTTTGAATTATATGTTCGAGTTGAACCTTATACAATAATCAAAAA
TCGTGAATGTGTTGGCTAAA

Downstream 100 bases:

>100_bases
GTTGTTGCAAAATAAAAAGATCATCCACTATTTATAGCGGATGATCTTTTACTTCATTACAACACTTCAATATACCCTTC
TGTTCCATGTACCCGAATTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein TetR; TetR Family HTH Transcriptional Regulator; Acrr-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; TetR Family Regulatory Protein Of MDR Cluster; Regulatory Protein TetR Family; Transcriptional Regulator TetR/AcrR Family Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKEGHALRDSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEDIMYEFSSI
AKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVP
SQYLASYMASAHIGVIQQWLNSGQKETPEEIARILSTIAVHGPFYAAGLKK

Sequences:

>Translated_211_residues
MKEGHALRDSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEDIMYEFSSI
AKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVP
SQYLASYMASAHIGVIQQWLNSGQKETPEEIARILSTIAVHGPFYAAGLKK
>Mature_211_residues
MKEGHALRDSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQDKFDLMTKCQEDIMYEFSSI
AKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMKAVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVP
SQYLASYMASAHIGVIQQWLNSGQKETPEEIARILSTIAVHGPFYAAGLKK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23830; Mature: 23830

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGHALRDSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQ
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCEEEEEHH
DKFDLMTKCQEDIMYEFSSIAKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHH
AVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLASYMASAHIGVIQQWL
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSGQKETPEEIARILSTIAVHGPFYAAGLKK
HCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MKEGHALRDSNLDLRVVRTKTAIRNALVELIEEKGFDAITVKDITTKANINRGTFYAHYQ
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCEEEEEHH
DKFDLMTKCQEDIMYEFSSIAKKRFPEVIADLGSNPSPTMPFLLITSILEFLNENSDFMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHH
AVLSPKGDLSFQTKLKDFMWKTLFEDTNGALINKENLLVPSQYLASYMASAHIGVIQQWL
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
NSGQKETPEEIARILSTIAVHGPFYAAGLKK
HCCCCCCHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA