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The map label for this gene is ydfF [H]

Identifier: 52141720

GI number: 52141720

Start: 3655271

End: 3655576

Strand: Direct

Name: ydfF [H]

Synonym: BCZK3526

Alternate gene names: 52141720

Gene position: 3655271-3655576 (Clockwise)

Preceding gene: 52141723

Following gene: 52141689

Centisome position: 68.96

GC content: 30.07

Gene sequence:

>306_bases
ATGAATATTTCTAAAGTGGATTTATTACTACGTTCTGATTTAAGAGTACATATATTATCCTATTTATTAGACGGTAAAGC
CTACCCTGCTAGTGAATTGGCTCATGTTGCCAAGATAAAACCTAAAACAGCTACCTATCATCTATCAAAAATGCAAGAAG
AAGGAATCCTTTCTATAGAAAAACATGGAAAACATAGTTATTACAGAATTTTTAATTCCGAAATATCAAAAATTCTTGAA
TCATTTCTTGTAGCTAGTCCTCAAGAAAAAATCAAGCCCTTGCTTCAATCATACCTAAAAAATTAA

Upstream 100 bases:

>100_bases
TCATTTTATCTTCCCCCTAAAATAATATCTTGTAACAATTTTACCATTTTGAAAATTAGATTAGCATGGAAATATACTTA
TTTTATTAGGAGTGTGAAAA

Downstream 100 bases:

>100_bases
TAAAAACGAAGCGATTTATTTTAATCGCTTCGTTTTCTCAGCTCATCATTTTTCCAAAATAATAACAAAAATAAATTATT
TCCTTTTGTTTTTTCCCTGG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNISKVDLLLRSDLRVHILSYLLDGKAYPASELAHVAKIKPKTATYHLSKMQEEGILSIEKHGKHSYYRIFNSEISKILE
SFLVASPQEKIKPLLQSYLKN

Sequences:

>Translated_101_residues
MNISKVDLLLRSDLRVHILSYLLDGKAYPASELAHVAKIKPKTATYHLSKMQEEGILSIEKHGKHSYYRIFNSEISKILE
SFLVASPQEKIKPLLQSYLKN
>Mature_101_residues
MNISKVDLLLRSDLRVHILSYLLDGKAYPASELAHVAKIKPKTATYHLSKMQEEGILSIEKHGKHSYYRIFNSEISKILE
SFLVASPQEKIKPLLQSYLKN

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11568; Mature: 11568

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISKVDLLLRSDLRVHILSYLLDGKAYPASELAHVAKIKPKTATYHLSKMQEEGILSIE
CCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEHH
KHGKHSYYRIFNSEISKILESFLVASPQEKIKPLLQSYLKN
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNISKVDLLLRSDLRVHILSYLLDGKAYPASELAHVAKIKPKTATYHLSKMQEEGILSIE
CCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEHH
KHGKHSYYRIFNSEISKILESFLVASPQEKIKPLLQSYLKN
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]