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The map label for this gene is 52140394

Identifier: 52140394

GI number: 52140394

Start: 4954640

End: 4954846

Strand: Reverse

Name: 52140394

Synonym: BCZK4868

Alternate gene names: NA

Gene position: 4954846-4954640 (Counterclockwise)

Preceding gene: 52140391

Following gene: 52140393

Centisome position: 93.47

GC content: 36.71

Gene sequence:

>207_bases
GTGGAGCCTATGGGTGTAAAAAATAAAATTAAAGAATTAAGAAAGCAGCATCATATAACGCAAGTTGAAATGGCAAAAGC
GATGCAGGTGACGCGGCAGACAATTGTGGCGATTGAAAACCATCATTACAATCCAAGTCTAGAGTTATCTTTAAAAATCG
CCAAATATTTTGGAGTGAAGGTGGAAGAAATATTTACGCTAGAGTAA

Upstream 100 bases:

>100_bases
AAGATGTTCAGTGAAATGTTTTTCTAAAATTTGTAAAGATATCTTTACTTGTATCTGGAAAATATTTATAATTTAAGTAA
AGATATCTTTACTTTCGAAG

Downstream 100 bases:

>100_bases
GGGGAGGAAAAATGAACGATACGAAAAAGTTAGTGATCGGTGCGACTTTTGGATTGTTTTTGGGAGACATTATAGTTCAT
ATTATGAATCCGGCTATACC

Product: DNA-binding protein; transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE

Sequences:

>Translated_68_residues
MEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE
>Mature_68_residues
MEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVKVEEIFTLE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7949; Mature: 7949

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVK
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCE
VEEIFTLE
EHHEEECC
>Mature Secondary Structure
MEPMGVKNKIKELRKQHHITQVEMAKAMQVTRQTIVAIENHHYNPSLELSLKIAKYFGVK
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCE
VEEIFTLE
EHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]