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The map label for this gene is atpF

Identifier: 52140253

GI number: 52140253

Start: 5112031

End: 5112537

Strand: Reverse

Name: atpF

Synonym: BCZK5009

Alternate gene names: 52140253

Gene position: 5112537-5112031 (Counterclockwise)

Preceding gene: 52140251

Following gene: 52140252

Centisome position: 96.45

GC content: 37.28

Gene sequence:

>507_bases
GTGCCAACTTTATTATTAGGGGCTGCCATTCCATTTGGAACGATTGCTTACACATTGTTCATTTTCTTACTTCTATTAGT
AATGCTACGCAAATTTGCGTGGGGTCCTTTAATGGGAATTATGAAAGAACGTGAAGAGCACGTTGCTAATGAAATCGACG
CTGCAGAAAGAAATAATGCTGAGGCGAAGAAATTAGTGGAAGAACAACGTGAGATGTTAAAACAATCGCGTGTTGAAGCA
CAAGAGTTAATCGAAAGAGCGAAAAAGCAAGCTGTAGATCAAAAGGATGTTATTGTTGCTGCTGCGAAAGAAGAAGCAGA
ATCAATTAAAGCATCTGCTGTACAAGAAATTCAACGCGAAAAAGAGCAAGCAATTGCTGCTTTACAAGAACAAGTTGCTT
CTTTATCTGTTCAAATTGCTTCTAAAGTAATTGAAAAAGAACTAAAAGAAGAAGATCAAGTGAAGTTAATTCGCGATTAT
ATTAAAGAAGTAGGAGAAGCGCGATGA

Upstream 100 bases:

>100_bases
AGTGTTTTTCCGAACTTTCTTCGCCATTGCTTTATGAACGAAACGTATGTCTTTTTTTTTCATATGATCAATTTAGATAT
TTTGAAGGGAGTGAATCCTT

Downstream 100 bases:

>100_bases
GCAATGGGATTGTAGCAAAACGTTATGCTGTCGCTCTTTTTAAAATTGCAAAAGAAAAACACGTATTAGAAATGTTTGAA
GAGGAATTACGCCTTGTACA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPTLLLGAAIPFGTIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVANEIDAAERNNAEAKKLVEEQREMLKQSRVEA
QELIERAKKQAVDQKDVIVAAAKEEAESIKASAVQEIQREKEQAIAALQEQVASLSVQIASKVIEKELKEEDQVKLIRDY
IKEVGEAR

Sequences:

>Translated_168_residues
MPTLLLGAAIPFGTIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVANEIDAAERNNAEAKKLVEEQREMLKQSRVEA
QELIERAKKQAVDQKDVIVAAAKEEAESIKASAVQEIQREKEQAIAALQEQVASLSVQIASKVIEKELKEEDQVKLIRDY
IKEVGEAR
>Mature_167_residues
PTLLLGAAIPFGTIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVANEIDAAERNNAEAKKLVEEQREMLKQSRVEAQ
ELIERAKKQAVDQKDVIVAAAKEEAESIKASAVQEIQREKEQAIAALQEQVASLSVQIASKVIEKELKEEDQVKLIRDYI
KEVGEAR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=159, Percent_Identity=30.8176100628931, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_BACAH (A0RL99)

Other databases:

- EMBL:   CP000485
- RefSeq:   YP_897499.1
- STRING:   A0RL99
- EnsemblBacteria:   EBBACT00000067917
- GeneID:   4543373
- GenomeReviews:   CP000485_GR
- KEGG:   btl:BALH_4812
- eggNOG:   COG0711
- GeneTree:   EBGT00050000001797
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- ProtClustDB:   PRK05759
- BioCyc:   BTHU412694:BALH_4812-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18957; Mature: 18826

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c881510)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLLGAAIPFGTIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVANEIDAAERNNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EAKKLVEEQREMLKQSRVEAQELIERAKKQAVDQKDVIVAAAKEEAESIKASAVQEIQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQAIAALQEQVASLSVQIASKVIEKELKEEDQVKLIRDYIKEVGEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
PTLLLGAAIPFGTIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVANEIDAAERNNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EAKKLVEEQREMLKQSRVEAQELIERAKKQAVDQKDVIVAAAKEEAESIKASAVQEIQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQAIAALQEQVASLSVQIASKVIEKELKEEDQVKLIRDYIKEVGEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA