Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 52078601

GI number:

Start: 120951

End: 124532

Strand: Direct

Name: rpoB

Synonym: BL02798

Alternate gene names: NA

Gene position: NA

Preceding gene: 52078600

Following gene: 52078602

Centisome position: NA

GC content: NA

Gene sequence:

>3582_bases
TTGACAGGTCAACTAGTTCAGTATGGACGACACCGCCAGCGCAGAAGCTATGCACGCATTAGCGAAGTGTTAGAATTACC
AAATCTCATTGAAATTCAAACCTCTTCTTATCAGTGGTTTCTTGATGAGGGTCTTAGAGAGATGTTTCAAGACATATCGC
CAATTGAGGATTTCACTGGTAACCTCTCTCTGGAATTTATCGACTACAGCTTGGGCGAGCCTAAGTATCCGGTAGAAGAA
TCAAAAGAGCGGGATGTGACCTATTCAGCTCCGCTGCGGGTTAAAGTCCGCTTAATCAACAAAGAAACCGGCGAAGTAAA
GGATCAGGATGTCTTCATGGGCGATTTCCCTATTATGACAGACACTGGAACCTTCATTATCAACGGTGCAGAACGGGTCA
TCGTATCTCAGCTCGTTCGTTCTCCAAGTGTATATTTTAGTGGTAAAGTAGACAAAAACGGTAAGAAAGGTTTTACCGCG
ACTGTCATTCCAAACCGTGGCGCATGGTTAGAATACGAGACTGATGCGAAAGATGTTGTTTACGTACGCATCGATCGCAC
ACGTAAGTTGCCGGTTACGGTTCTTTTGCGTGCTCTTGGCTTCGGATCTGACCAAGAGATCATTGATCTCATCGGTGAAA
ACGAGTATCTGCGCAATACGCTTGATAAAGATAATACGGAAAACACCGATAAAGCGCTTCTTGAAATCTACGAGCGTCTT
CGTCCAGGGGAGCCGCCTACCGTAGAAAACGCAAAAAGCCTGCTTGATTCAAGGTTCTTTGATCCGAAAAGATATGACCT
TGCGAGTGTAGGACGTTATAAAATTAATAAAAAGCTTCACATCAAAAACCGACTTTTTAATCAGCGGCTTGCTGAAACGC
TAGTCGACCCTGAAACAGGCGAAATCCTTGCCGAAAAAGGAGCGATTTTAGACAGAAGAACGCTTGATAAAGTTCTGCCG
TACCTTGAAAACGGAATCGGTTTTAAAAAGCTTTATCCGAACGGCGGAGTTGTCGAAGACGAAGTAACGCTTCAGTCTAT
CAAAATCTATGCTCCGACAGACCAAGAAGGGGAGCAGACAATCAATGTGATTGGAAATGCTTATATCGAAGAAGGCGTTA
AGAATATTACACCTTCTGATATTATCGCTTCCATCAGCTATTTCTTTAACCTGCTTCACGGAGTGGGCGATACCGACGAT
ATCGACCATCTAGGAAACCGCCGTCTCCGTTCAGTGGGAGAGCTTCTGCAAAACCAATTCCGTATTGGTTTAAGCAGAAT
GGAGCGCGTTGTTCGTGAAAGAATGTCTATTCAAGATACAAACACGATCACGCCGCAGCAGCTGATCAATATTCGCCCTG
TCATCGCATCAATCAAAGAGTTTTTCGGAAGCTCGCAGCTTTCTCAGTTTATGGATCAGACGAATCCGCTTGCTGAGCTG
ACGCATAAGCGCCGTCTGTCAGCGCTCGGACCGGGCGGTTTGACTCGTGAGCGCGCCGGAATGGAAGTCCGTGACGTTCA
CTATTCACACTACGGCCGGATGTGTCCGATTGAAACCCCTGAGGGTCCAAACATCGGCTTGATCAACTCGCTTTCTTCAT
TCGCGAAAGTGAACCGTTTCGGCTTCATCGAAACGCCGTATCGCCGCGTCGATCCTGAAACTGGAAAAGTAACGCCGAGA
ATCGATTACTTGACAGCTGATGAAGAAGACAACTATGTCGTTGCCCAGGCAAACGCACGCCTGAATGATGACGGTTCTTT
TGTGGATGACAGCATCGTCGCCCGTTTCAGAGGGGAGAACACCGTTGTTCCGAAAGACCGCGTCGACTATATGGACGTTT
CGCCTAAACAGGTTGTCTCTGCCGCGACTGCATGTATTCCTTTCTTGGAAAACGATGACTCAAACCGCGCCCTTATGGGA
GCGAACATGCAACGTCAGGCCGTACCTCTTATGCAGCCTGAATCGCCGATCGTCGGAACCGGGATGGAATATGTATCTGC
GAAAGACTCCGGTGCCGCTGTTATTTGCCGCCACCCTGGAATCGTTGAACGGGTGGAAGCGAAGAACATCTGGGTGCGCC
GCTATGAAGAAGTCGACGGCCAGAAAGTCAAAGGGAACCTTGATAAATACAGCCTGCTGAAGTTTGTCCGTTCCAACCAG
GGAACTTGCTACAACCAGCGTCCGATCGTAAGCGTCGGTGATGAGGTTGAAAAAGGTGAAATTTTAGCTGACGGTCCGTC
CATGGAAAAAGGTGAGCTTGCCCTTGGACGCAACGTCATGGTCGGCTTTATGACATGGGATGGCTACAACTATGAGGATG
CCATCATCATGAGCGAACGCCTTGTAAAAGACGACGTATACACGTCTATTCATATTGAAGAATACGAATCAGAGGCCCGG
GATACAAAACTCGGACCTGAAGAAATCACTCGCGATATTCCGAACGTCGGTGAGGACGCTCTTCGCAATCTCGATGAACG
CGGAATTATCCGTGTCGGTGCTGAAGTAAAAGACGGAGATCTTCTTGTTGGTAAAGTAACCCCTAAAGGTGTTACAGAGC
TTACGGCGGAAGAACGCCTGCTTCATGCCATCTTCGGGGAAAAAGCGCGTGAAGTGCGTGATACGTCGCTGCGTGTACCT
CACGGAGGCGGCGGTATCATCCTTGATGTAAAAGTGTTCAACCGCGAAGACGGAGACGAACTGCCTCCGGGCGTTAACCA
GCTCGTCCGCGTCTACATCGTTCAGAAGCGTAAAATTTCTGAAGGGGACAAAATGGCCGGACGCCACGGTAACAAAGGTG
TTATTTCGAAAATTCTTCCGGAGGAAGATATGCCGTATCTGCCTGACGGAACGCCGATTGACATCATGTTAAACCCGCTG
GGCGTACCATCGCGTATGAACATCGGGCAGGTGTTGGAGCTGCACCTTGGTATGGCTGCACGCCGCCTCGGTCTGCATGT
CGCGTCACCTGTATTTGACGGTGCCCGCGAAGAAGATGTGTGGGAAACCCTTGAAGAAGCCGGCATGTCAAGAGACGCAA
AAACCGTCCTTTACGACGGCCGAACTGGGGAGCCGTTTGACAACCGGGTTTCTGTCGGCATCATGTACATGATCAAACTG
GCACACATGGTTGACGACAAATTGCACGCACGTTCAACCGGTCCTTACTCACTCGTTACCCAGCAGCCTCTCGGAGGTAA
AGCGCAGTTCGGCGGACAGCGTTTTGGAGAGATGGAAGTTTGGGCGCTTGAAGCTTATGGTGCAGCATATACGCTACAAG
AGATCCTGACTGTTAAATCGGATGATGTCGTAGGCCGTGTGAAAACATATGAAGCCATCGTAAAAGGCGACAATGTTCCA
GAACCTGGTGTTCCGGAATCGTTCAAAGTATTGATCAAAGAGCTTCAAAGCTTAGGTATGGACGTCAAAATTCTATCAAG
CGACGAAGAAGAAATCGAAATGAGAGACTTGGAAGACGACGAAGACGCGAAACAAAACGAAGGGCTTTCTCTGCCGAATG
ATGAAGAGTCCGAAGAGTTGGTTTCTGCTGACGCAGAACGCGATGTCGTTACAAAAGAATAA

Upstream 100 bases:

>100_bases
GAAACCCTTTTTTCTTTTGTCTTGTAAAAGTATTTCTTACATATTTGAGGAAGAAATGCTTGTTACACATATATTACGCA
TGATTTGAGGGGTGAATCAG

Downstream 100 bases:

>100_bases
ACGAATTTTATACGCAAGTGACAGGGTATAACCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTGGATGTGAACAATTTT
GAGTATATGAACATCGGTCT

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1193_residues
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEE
SKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTA
TVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGENEYLRNTLDKDNTENTDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVDPETGEILAEKGAILDRRTLDKVLP
YLENGIGFKKLYPNGGVVEDEVTLQSIKIYAPTDQEGEQTINVIGNAYIEEGVKNITPSDIIASISYFFNLLHGVGDTDD
IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFGFIETPYRRVDPETGKVTPR
IDYLTADEEDNYVVAQANARLNDDGSFVDDSIVARFRGENTVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMG
ANMQRQAVPLMQPESPIVGTGMEYVSAKDSGAAVICRHPGIVERVEAKNIWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVEKGEILADGPSMEKGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEAR
DTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVP
HGGGGIILDVKVFNREDGDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHLGMAARRLGLHVASPVFDGAREEDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKL
AHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVP
EPGVPESFKVLIKELQSLGMDVKILSSDEEEIEMRDLEDDEDAKQNEGLSLPNDEESEELVSADAERDVVTKE

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA