| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yusN [H]
Identifier: 51893938
GI number: 51893938
Start: 3014632
End: 3015123
Strand: Reverse
Name: yusN [H]
Synonym: STH2800
Alternate gene names: 51893938
Gene position: 3015123-3014632 (Counterclockwise)
Preceding gene: 51893939
Following gene: 51893937
Centisome position: 84.55
GC content: 65.04
Gene sequence:
>492_bases ATGCGCCGACCGTCGTCATGTGAGGAGGGGAGAGCCATGCAGCAGCAAGGGGTGCAGCCCCAGTTCAGCATGCAGGGCGG CCACCTGATCATGGCGCACCAGGAGCAGACCGGCCTGCCCAAGGTCAAGGACCCGTCGATGAACGACCGCGACCGCATGC AGGACCTGCTGGCGCAGGAGAAGTACCTGACGTCCGGCTACAACATGGCCCTGATTGAGGCCAGCCACGATGCGCTGTTC GACGTGATCAAGCAGAACTGCGACGCCAGCTACCAGATGCAGCGGCAGATTTTCAACCTCATGTTCAAGAAGGGCTGGTA CAAGCTGCCCGTGGCCGACGCGCAGATGGTGCAGCACACCTTCCAGCAGTTCGTGCAGTACCAGACCCAGTTCCCGTTCC CCCCGGGCCCGCAGGTCGCGCAGATGGCCGCGCAGACGGCCTCCGGCCAGGCCGGCGGCCAGGGAGGCGGGATGCAGGCC AACCGTCAGTAG
Upstream 100 bases:
>100_bases TTCCAGATCGCCGAACAGCACCAGCGCAACCTGGAGCGGTTGCTCACCCACCTCCACGAGCATGTCAACCAGCCCACGAC GATCGCCGTGTCGGGCGCCG
Downstream 100 bases:
>100_bases TCAACCGGCACAACAACGGCGGCGGAGAGCTCTCCGCCGCCGTTTCTGAGGAGGGGATACCGTGCGCGCTCCCATCACCC TGGCCGTGGTCGGGCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRRPSSCEEGRAMQQQGVQPQFSMQGGHLIMAHQEQTGLPKVKDPSMNDRDRMQDLLAQEKYLTSGYNMALIEASHDALF DVIKQNCDASYQMQRQIFNLMFKKGWYKLPVADAQMVQHTFQQFVQYQTQFPFPPGPQVAQMAAQTASGQAGGQGGGMQA NRQ
Sequences:
>Translated_163_residues MRRPSSCEEGRAMQQQGVQPQFSMQGGHLIMAHQEQTGLPKVKDPSMNDRDRMQDLLAQEKYLTSGYNMALIEASHDALF DVIKQNCDASYQMQRQIFNLMFKKGWYKLPVADAQMVQHTFQQFVQYQTQFPFPPGPQVAQMAAQTASGQAGGQGGGMQA NRQ >Mature_163_residues MRRPSSCEEGRAMQQQGVQPQFSMQGGHLIMAHQEQTGLPKVKDPSMNDRDRMQDLLAQEKYLTSGYNMALIEASHDALF DVIKQNCDASYQMQRQIFNLMFKKGWYKLPVADAQMVQHTFQQFVQYQTQFPFPPGPQVAQMAAQTASGQAGGQGGGMQA NRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012851 [H]
Pfam domain/function: PF07875 Coat_F [H]
EC number: NA
Molecular weight: Translated: 18348; Mature: 18348
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPSSCEEGRAMQQQGVQPQFSMQGGHLIMAHQEQTGLPKVKDPSMNDRDRMQDLLAQE CCCCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH KYLTSGYNMALIEASHDALFDVIKQNCDASYQMQRQIFNLMFKKGWYKLPVADAQMVQHT HHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH FQQFVQYQTQFPFPPGPQVAQMAAQTASGQAGGQGGGMQANRQ HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRPSSCEEGRAMQQQGVQPQFSMQGGHLIMAHQEQTGLPKVKDPSMNDRDRMQDLLAQE CCCCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH KYLTSGYNMALIEASHDALFDVIKQNCDASYQMQRQIFNLMFKKGWYKLPVADAQMVQHT HHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH FQQFVQYQTQFPFPPGPQVAQMAAQTASGQAGGQGGGMQANRQ HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]