| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is mviM [H]
Identifier: 51893937
GI number: 51893937
Start: 3013644
End: 3014570
Strand: Reverse
Name: mviM [H]
Synonym: STH2799
Alternate gene names: 51893937
Gene position: 3014570-3013644 (Counterclockwise)
Preceding gene: 51893938
Following gene: 51893935
Centisome position: 84.53
GC content: 72.17
Gene sequence:
>927_bases GTGCGCGCTCCCATCACCCTGGCCGTGGTCGGGCTGGGCAACATCGCCCGGAAGGCTCACCTGCCGGTGCTCACCAGCCA TCCGGAGGTGGAGATCATCGGCCTGTCCAGCCGCACCGGGCGGAACGTGGATGAGCTGGCCGCGCAGTACCGGCTGCGGC TCCGGGCCCGCACGTTTGCCGAGATCCTGGCCGCGCGGCCCCGGGCCGCCTACCTGCTCAGCGCCACGCCGGCGCACCGG GAGCAGGCGATCGCCCTTATGGAAGCCGGCATCGACGTGTTCATGGAGAAGCCCCTGGCCGACAACCTGGTCGACGCCGA GGCGATCGCGGAAGCAGCCGGCCGCACGGGCCGGCTGCTGATGGTCGGCTTCAACCGCCGTTACGCTCCCGCCTACCGCC GGGCGAAGGCCTTGTTTCACGACTCGGGCAGAAGGATCGAGTACGTGCTGGTCCAGAAACACCGCACCGGTGGCGGGACG CGCTGGCCGCTCCGGTTCTACGTGACCGACGACGTCATCCACATCATCGACCTGGCCCGGTTCTTCGCCGGCGACCTGCA GCTGCGGACGGCCTGCGCCCGCACCGGGCTGGTGGCCGCGCAGATGGAGTCGGCAGACGCCACCCTGGTGCAGCTGTCCC AGAGCTTCAGCGCCGGGGCGGTCACCGAGCGGGTCGAGCTGCACGGCGGCGGCCTGACGGTCATCGTCGAGGAGATGGAG CGGCTGGTCGTCCGGGAGGACGGGGCCGAGCGGGTGGAGCCGCTCTTCGGGTCGTGGACGCCCACCCTGCAGAAGCGGGG CATCGCGCCCGAGCTGGAGCACTTCCTCGCCTGCCTGCGGGAGGGGCGGACGCCGGAGACCTCCGTGGCCGAGGCGCTGG CCACGCAGCGGCTGGCGGAGGAGATCCTCCGGGCCGCGGGCGGCTGA
Upstream 100 bases:
>100_bases GGCGGCCAGGGAGGCGGGATGCAGGCCAACCGTCAGTAGTCAACCGGCACAACAACGGCGGCGGAGAGCTCTCCGCCGCC GTTTCTGAGGAGGGGATACC
Downstream 100 bases:
>100_bases GCGGGGCCGGGGACCGGGCGATCAGGCCCGGGCCTCCGCAGCGGGCTCCTTCTCGCCCTTGGTCACCAGCAGCATGCAGA GGGCGGCCAGGGCCATGAAC
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRAPITLAVVGLGNIARKAHLPVLTSHPEVEIIGLSSRTGRNVDELAAQYRLRLRARTFAEILAARPRAAYLLSATPAHR EQAIALMEAGIDVFMEKPLADNLVDAEAIAEAAGRTGRLLMVGFNRRYAPAYRRAKALFHDSGRRIEYVLVQKHRTGGGT RWPLRFYVTDDVIHIIDLARFFAGDLQLRTACARTGLVAAQMESADATLVQLSQSFSAGAVTERVELHGGGLTVIVEEME RLVVREDGAERVEPLFGSWTPTLQKRGIAPELEHFLACLREGRTPETSVAEALATQRLAEEILRAAGG
Sequences:
>Translated_308_residues MRAPITLAVVGLGNIARKAHLPVLTSHPEVEIIGLSSRTGRNVDELAAQYRLRLRARTFAEILAARPRAAYLLSATPAHR EQAIALMEAGIDVFMEKPLADNLVDAEAIAEAAGRTGRLLMVGFNRRYAPAYRRAKALFHDSGRRIEYVLVQKHRTGGGT RWPLRFYVTDDVIHIIDLARFFAGDLQLRTACARTGLVAAQMESADATLVQLSQSFSAGAVTERVELHGGGLTVIVEEME RLVVREDGAERVEPLFGSWTPTLQKRGIAPELEHFLACLREGRTPETSVAEALATQRLAEEILRAAGG >Mature_308_residues MRAPITLAVVGLGNIARKAHLPVLTSHPEVEIIGLSSRTGRNVDELAAQYRLRLRARTFAEILAARPRAAYLLSATPAHR EQAIALMEAGIDVFMEKPLADNLVDAEAIAEAAGRTGRLLMVGFNRRYAPAYRRAKALFHDSGRRIEYVLVQKHRTGGGT RWPLRFYVTDDVIHIIDLARFFAGDLQLRTACARTGLVAAQMESADATLVQLSQSFSAGAVTERVELHGGGLTVIVEEME RLVVREDGAERVEPLFGSWTPTLQKRGIAPELEHFLACLREGRTPETSVAEALATQRLAEEILRAAGG
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=308, Percent_Identity=31.8181818181818, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 33751; Mature: 33751
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPITLAVVGLGNIARKAHLPVLTSHPEVEIIGLSSRTGRNVDELAAQYRLRLRARTFA CCCCEEEEEECCCHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH EILAARPRAAYLLSATPAHREQAIALMEAGIDVFMEKPLADNLVDAEAIAEAAGRTGRLL HHHHCCCCCEEEEECCCCHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE MVGFNRRYAPAYRRAKALFHDSGRRIEYVLVQKHRTGGGTRWPLRFYVTDDVIHIIDLAR EEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHH FFAGDLQLRTACARTGLVAAQMESADATLVQLSQSFSAGAVTERVELHGGGLTVIVEEME HHHCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHCCCCCCHHHEEEECCCCCEEHHHHHH RLVVREDGAERVEPLFGSWTPTLQKRGIAPELEHFLACLREGRTPETSVAEALATQRLAE HHHHHCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EILRAAGG HHHHHCCC >Mature Secondary Structure MRAPITLAVVGLGNIARKAHLPVLTSHPEVEIIGLSSRTGRNVDELAAQYRLRLRARTFA CCCCEEEEEECCCHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH EILAARPRAAYLLSATPAHREQAIALMEAGIDVFMEKPLADNLVDAEAIAEAAGRTGRLL HHHHCCCCCEEEEECCCCHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHCCCCCCEE MVGFNRRYAPAYRRAKALFHDSGRRIEYVLVQKHRTGGGTRWPLRFYVTDDVIHIIDLAR EEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHH FFAGDLQLRTACARTGLVAAQMESADATLVQLSQSFSAGAVTERVELHGGGLTVIVEEME HHHCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHCCCCCCHHHEEEECCCCCEEHHHHHH RLVVREDGAERVEPLFGSWTPTLQKRGIAPELEHFLACLREGRTPETSVAEALATQRLAE HHHHHCCCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EILRAAGG HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]