| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893918
Identifier: 51893918
GI number: 51893918
Start: 2998701
End: 2998883
Strand: Reverse
Name: 51893918
Synonym: STH2780
Alternate gene names: NA
Gene position: 2998883-2998701 (Counterclockwise)
Preceding gene: 51893919
Following gene: 51893916
Centisome position: 84.09
GC content: 59.56
Gene sequence:
>183_bases ATGGCGAGCATGCTGGCCATGATGAACAGGCTGATGAGGATCCGGCGCATTCGATTCTCCCCTTTCCGTTGTTTGTCGAT GAAGCAACCAGTCGGGCTCCCGGTACGCTGTACCGGGTCTCTTTTTGCATCCGCCCGAACCTCGAAGGCCGTGTCAGGGG CGGGCTTGGCCCCGCTCATATAG
Upstream 100 bases:
>100_bases TCCGCCGACCTTGCATGAATGCAGCGCCTAAGTTGTTGTCCGTAAAGCTTAGAAAGAGGAAGGACCGCCGCTCCGCGGCT CGGCCAGGGCGGTCGCGGCC
Downstream 100 bases:
>100_bases CTTTCGGCGCAGGGCCGCTGCCCGGTTCATCAGGGCCGACTGGCGGGACTCCAGGGCGTACTGCATCGCCAGGTTCGCGA AGAGCTGGGCCTCGTCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MASMLAMMNRLMRIRRIRFSPFRCLSMKQPVGLPVRCTGSLFASARTSKAVSGAGLAPLI
Sequences:
>Translated_60_residues MASMLAMMNRLMRIRRIRFSPFRCLSMKQPVGLPVRCTGSLFASARTSKAVSGAGLAPLI >Mature_59_residues ASMLAMMNRLMRIRRIRFSPFRCLSMKQPVGLPVRCTGSLFASARTSKAVSGAGLAPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6556; Mature: 6425
Theoretical pI: Translated: 12.73; Mature: 12.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 11.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMLAMMNRLMRIRRIRFSPFRCLSMKQPVGLPVRCTGSLFASARTSKAVSGAGLAPLI CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASMLAMMNRLMRIRRIRFSPFRCLSMKQPVGLPVRCTGSLFASARTSKAVSGAGLAPLI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA