Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
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Accession | NC_006177 |
Length | 3,566,135 |
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The map label for this gene is 51893896
Identifier: 51893896
GI number: 51893896
Start: 2977137
End: 2978072
Strand: Reverse
Name: 51893896
Synonym: STH2758
Alternate gene names: NA
Gene position: 2978072-2977137 (Counterclockwise)
Preceding gene: 51893897
Following gene: 51893895
Centisome position: 83.51
GC content: 68.91
Gene sequence:
>936_bases GTGGACAAGGGGGCCGGCCCGTCGGACGGGTCACAGGCCACAGCCCCGGAACGCGACTGGGAGGAGCAGGCGCGCAGGGC GGACGAGCGGCTGGCCGAGTTGCGCCGGGAGCTCAGTCATCCCGTCTTCGTGCCCACGCAGGTGCCCGAAGGTCTCCACC CCCAGATGCCGTCGCAGAGCGATCGGCTGGTGAGCATCGCCTACGTCGACGATGACCTCAACCGAGTGCTCAGAGTGTCC AGCGGTCCCCTGGGGTGCTGCATCGACGCCGACCCGAACAAGATGGTCGCCGGCGGCACGCCCATCCGCGACGGCCGTGA GGCGCGCTTTATCCCATACCAGCCCGAGTTCGGCGGGAACATCCTCTGGTGGCAGGAGGACGGGGCCTACGTCGCGCTTT CCGGCCCGCACCTGACGGAGGAGGACCTCTTCGCCATCGCCGAGTTCCTGTCGCCTACGGCGACCCTGACAGGCCCGCCG GACGCGCTGCCTCCCGACGTCTACCCGCCGGACTACCGCACGGAGGTTCCCCAAGTCGACGCGGTGATCGACGCCTTCCT GGCCAAGGATGTCCACCGTCTGGCATCCTGCGACATGCTCCGCTGCGAGGAGGGCGCGGAAGGCGCGCTGGAGCCCGTGG TGACGTGGGGGTCCTGTGAGGTCAACAACACCTGGACGGGATGGGACACCGTCCGCAGCCTGGTGGAGGGCTGGGTGGGG GAACCGCGCCTGCTCTACGCTGCCTACCGCGTGCAGGGCATCGGGGACTGGGCCTATCTCGTGCAGTTCGCGAAGTACCG CCACGACCAACGGCCCAAGTCTGCGGTCCTGGACGGCGAGGGACGGATCCTGCAGCTGTGGATGGGCTGCGGCGCGCTGT TCGACATGCAGGCTGACCATTATGAGCCCATCGCACCGCCGCGCACCGGTCTGTAG
Upstream 100 bases:
>100_bases CACCAGTCCGACGGATGGTCAGGGGGCGGCGCCGCCGGCCGCGCCCGAAGGCACGGCGGCGCCACCGGGGGAGGCGCAGG CGCCCGGGTTCTCAGGGGGC
Downstream 100 bases:
>100_bases TCTGTCCCGGCTTTCTGCCGAACACCCCGTGCCGCGGCATGAAGGCCACCGACCGCGCGGCATCCCGTTGCCTTCCCGAA ATTGCCGGAACCTTTCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQSDRLVSIAYVDDDLNRVLRVS SGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGNILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPP DALPPDVYPPDYRTEVPQVDAVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADHYEPIAPPRTGL
Sequences:
>Translated_311_residues MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQSDRLVSIAYVDDDLNRVLRVS SGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGNILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPP DALPPDVYPPDYRTEVPQVDAVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADHYEPIAPPRTGL >Mature_311_residues MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQSDRLVSIAYVDDDLNRVLRVS SGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGNILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPP DALPPDVYPPDYRTEVPQVDAVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADHYEPIAPPRTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34416; Mature: 34416
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC DRLVSIAYVDDDLNRVLRVSSGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGN CCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCC ILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPPDALPPDVYPPDYRTEVPQVD EEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG HHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHCC EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADH CCCEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHCCHHCCCCCCC YEPIAPPRTGL CCCCCCCCCCC >Mature Secondary Structure MDKGAGPSDGSQATAPERDWEEQARRADERLAELRRELSHPVFVPTQVPEGLHPQMPSQS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC DRLVSIAYVDDDLNRVLRVSSGPLGCCIDADPNKMVAGGTPIRDGREARFIPYQPEFGGN CCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCC ILWWQEDGAYVALSGPHLTEEDLFAIAEFLSPTATLTGPPDALPPDVYPPDYRTEVPQVD EEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AVIDAFLAKDVHRLASCDMLRCEEGAEGALEPVVTWGSCEVNNTWTGWDTVRSLVEGWVG HHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHHCC EPRLLYAAYRVQGIGDWAYLVQFAKYRHDQRPKSAVLDGEGRILQLWMGCGALFDMQADH CCCEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHCCHHCCCCCCC YEPIAPPRTGL CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA