Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
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Accession | NC_006177 |
Length | 3,566,135 |
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The map label for this gene is pgcA [H]
Identifier: 51893872
GI number: 51893872
Start: 2936886
End: 2938646
Strand: Reverse
Name: pgcA [H]
Synonym: STH2734
Alternate gene names: 51893872
Gene position: 2938646-2936886 (Counterclockwise)
Preceding gene: 51893873
Following gene: 51893871
Centisome position: 82.4
GC content: 72.12
Gene sequence:
>1761_bases ATGTCCACGGTCATGGAACGCTTCCGGCTCTGGAGCGAGGATCCGTACTTCGATGAGGAGACCCGCCGGGAACTGGCCGG CGTCGCCGGCGATCCCCGGGAAATCGAGGACCGCTTCTATCAGATGCTCGCGTTCGGCACGGGCGGGCTGCGGGGGGTCA TCGGCGCGGGCACCAACCGCATCAACCGGTACATGGTTCGCCTGGCCACGCAGGGGCTGGCGGAGGCGCTTCGCGCCACG GGCCCCGACGCCCTGCGCAGGGGCGTCGTCATCGCCCACGACTCCCGCCGGCGCTCGGCCGAGTTCGCCCGCGAGGCGGC CTTCACCCTGGCCGCCAACGGGGTCGTCGCGCACCTGTGGGAGGGGCTGCGGCCCACGCCCATGCTCTCCTTCGCCGTGC GGAAGCTGGGCGCGGCGGCGGGCATCGTCATCACTGCCAGCCACAACCCGCCCGAGTACAACGGGTACAAGGTGTACTGG GAGGACGGCGGCCAGGTGCCGCCGGACCGGGCCGGTCAGATCCAGGCCGCCATGCAGGCGGTGGGCGACATCCGCTCGAT CCGGCCGATGGCCGAGGGGGAGGCCCGTACCCGGGGGCTCCTGCGGCCGGTCCCGCCGGAGGTGGACGAGGCTTACTACA GTCGGCTGCTGGGGCTCGTCTCGGCTTCGCCCACCCAGCGGCACGCGTTGCGCATCCTGTATACGCCGCTGCACGGCACG GGGCTCGTGCCGGTGCGGACCGTGCTGGAGCGGGCCGGCTTCCCCGTGGAGGTGGTGGCCGAGCAGGCGGAGCCTGACCC CGGCTTCCCCACCGTGGCCAAGCCGAACCCGGAGGAACCGGAGGTGTACGAGATCGCGCTGCGCCGCGCCGCTTCCGGCC GTCCCGACCTGATCCTGGCCACGGATCCCGACGCCGACCGGCTCGGCGTGCTGGTCCGGGACCGGGAGGGCGGCTACCGG GCGCTGACGGGCAACCAGATCGGGGCGATCCTGGCGGAGCAGATCCTGCGCTCCCGGGCAGAGGCGGGGACGCTGCCGGC CAACGGCGCCGTGATCAAGACCATCGCCACATCCAACCTGGTCGCCTCCCTCTGCCGGGAGTACGGGGTGACCCTGCTGG AGACGCACACGGGGTTCAAGTTCATCGGCGAGAAGATCAAGGAGTTCGAAGAGACGGGCAGCCACGAGTTCCTCTTCGGC TTCGAGGAGAGCTACGGCTACCTGGCCGCGACCTTCGTGCGGGACAAGGACGCGGTGATGGCCGCCCTGCTGGTCGCCGA CGCCGCCGCCCACCACAAGGCGGAGGGGCGCACCCTGCTGGACGCGCTGGAGGCGATCTGGCAGCGCCACGGCTACTTCC AGGAGGGGCTGCACAACGTCACCCTGCCGGGCCGGGACGGGCAGGCCCGGATCCGGTCCCTGATGGCGGCCCTGCGGGCC GACCCTCCCCGGGCCTTCGCCGGCGTCCCCGTCGCCTACCGCGACGACTACGCCGCGGGCACCGGCGTGGAAGTGGCCAC CGGCCGCACTTACCCGCTCCAGCTGGGGCGGGCGGAGGTGCTGCACTACCGCTTCGCCGACGGCGGCTTCGTCATGGTGC GGCCGTCGGGCACCGAACCGAAGCTGAAGGTGTACGTTTCGGTGGTGGGTGCCGACGCGGCCGATGCCGTCGCCCTGCGG GACCGGGTGATGGCCGACGCCCTGGCCCGGATGGGGCTCTCGGGAGGGGCCGGTGAACCGGCCGGTGAAAGAATAGAATA G
Upstream 100 bases:
>100_bases GGGCCGTGGCGGTACCGACCGGAGCCGCGCCGCCCACCGGGGCGCGGCCGGGTCCGCGCGCCTGCGCGGTTACCGGCGCA AGACGAGGAGGATCTGGTGC
Downstream 100 bases:
>100_bases GAATACAGACGTGCGGGCCGCCGGGATTGGACAGCCGTCAGGGCGGCGGCTCGTGCGCAACCGGCTGGAGGGGATGGGGA TGAGTTCGGGTACCGAGGAC
Product: phosphoglucomutase/phosphomannomutase family protein
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MSTVMERFRLWSEDPYFDEETRRELAGVAGDPREIEDRFYQMLAFGTGGLRGVIGAGTNRINRYMVRLATQGLAEALRAT GPDALRRGVVIAHDSRRRSAEFAREAAFTLAANGVVAHLWEGLRPTPMLSFAVRKLGAAAGIVITASHNPPEYNGYKVYW EDGGQVPPDRAGQIQAAMQAVGDIRSIRPMAEGEARTRGLLRPVPPEVDEAYYSRLLGLVSASPTQRHALRILYTPLHGT GLVPVRTVLERAGFPVEVVAEQAEPDPGFPTVAKPNPEEPEVYEIALRRAASGRPDLILATDPDADRLGVLVRDREGGYR ALTGNQIGAILAEQILRSRAEAGTLPANGAVIKTIATSNLVASLCREYGVTLLETHTGFKFIGEKIKEFEETGSHEFLFG FEESYGYLAATFVRDKDAVMAALLVADAAAHHKAEGRTLLDALEAIWQRHGYFQEGLHNVTLPGRDGQARIRSLMAALRA DPPRAFAGVPVAYRDDYAAGTGVEVATGRTYPLQLGRAEVLHYRFADGGFVMVRPSGTEPKLKVYVSVVGADAADAVALR DRVMADALARMGLSGGAGEPAGERIE
Sequences:
>Translated_586_residues MSTVMERFRLWSEDPYFDEETRRELAGVAGDPREIEDRFYQMLAFGTGGLRGVIGAGTNRINRYMVRLATQGLAEALRAT GPDALRRGVVIAHDSRRRSAEFAREAAFTLAANGVVAHLWEGLRPTPMLSFAVRKLGAAAGIVITASHNPPEYNGYKVYW EDGGQVPPDRAGQIQAAMQAVGDIRSIRPMAEGEARTRGLLRPVPPEVDEAYYSRLLGLVSASPTQRHALRILYTPLHGT GLVPVRTVLERAGFPVEVVAEQAEPDPGFPTVAKPNPEEPEVYEIALRRAASGRPDLILATDPDADRLGVLVRDREGGYR ALTGNQIGAILAEQILRSRAEAGTLPANGAVIKTIATSNLVASLCREYGVTLLETHTGFKFIGEKIKEFEETGSHEFLFG FEESYGYLAATFVRDKDAVMAALLVADAAAHHKAEGRTLLDALEAIWQRHGYFQEGLHNVTLPGRDGQARIRSLMAALRA DPPRAFAGVPVAYRDDYAAGTGVEVATGRTYPLQLGRAEVLHYRFADGGFVMVRPSGTEPKLKVYVSVVGADAADAVALR DRVMADALARMGLSGGAGEPAGERIE >Mature_585_residues STVMERFRLWSEDPYFDEETRRELAGVAGDPREIEDRFYQMLAFGTGGLRGVIGAGTNRINRYMVRLATQGLAEALRATG PDALRRGVVIAHDSRRRSAEFAREAAFTLAANGVVAHLWEGLRPTPMLSFAVRKLGAAAGIVITASHNPPEYNGYKVYWE DGGQVPPDRAGQIQAAMQAVGDIRSIRPMAEGEARTRGLLRPVPPEVDEAYYSRLLGLVSASPTQRHALRILYTPLHGTG LVPVRTVLERAGFPVEVVAEQAEPDPGFPTVAKPNPEEPEVYEIALRRAASGRPDLILATDPDADRLGVLVRDREGGYRA LTGNQIGAILAEQILRSRAEAGTLPANGAVIKTIATSNLVASLCREYGVTLLETHTGFKFIGEKIKEFEETGSHEFLFGF EESYGYLAATFVRDKDAVMAALLVADAAAHHKAEGRTLLDALEAIWQRHGYFQEGLHNVTLPGRDGQARIRSLMAALRAD PPRAFAGVPVAYRDDYAAGTGVEVATGRTYPLQLGRAEVLHYRFADGGFVMVRPSGTEPKLKVYVSVVGADAADAVALRD RVMADALARMGLSGGAGEPAGERIE
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=560, Percent_Identity=30.5357142857143, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI31377548, Length=592, Percent_Identity=30.9121621621622, Blast_Score=254, Evalue=2e-67, Organism=Escherichia coli, GI1786904, Length=532, Percent_Identity=26.1278195488722, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1788361, Length=353, Percent_Identity=25.4957507082153, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71993870, Length=578, Percent_Identity=29.4117647058824, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71993878, Length=312, Percent_Identity=31.7307692307692, Blast_Score=140, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323934, Length=576, Percent_Identity=32.4652777777778, Blast_Score=236, Evalue=8e-63, Organism=Drosophila melanogaster, GI20129809, Length=541, Percent_Identity=31.6081330868762, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24651977, Length=467, Percent_Identity=32.762312633833, Blast_Score=233, Evalue=4e-61, Organism=Drosophila melanogaster, GI24653722, Length=544, Percent_Identity=29.5955882352941, Blast_Score=216, Evalue=5e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 63479; Mature: 63348
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVMERFRLWSEDPYFDEETRRELAGVAGDPREIEDRFYQMLAFGTGGLRGVIGAGTNR CCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHH INRYMVRLATQGLAEALRATGPDALRRGVVIAHDSRRRSAEFAREAAFTLAANGVVAHLW HHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH EGLRPTPMLSFAVRKLGAAAGIVITASHNPPEYNGYKVYWEDGGQVPPDRAGQIQAAMQA CCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH VGDIRSIRPMAEGEARTRGLLRPVPPEVDEAYYSRLLGLVSASPTQRHALRILYTPLHGT HHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCC GLVPVRTVLERAGFPVEVVAEQAEPDPGFPTVAKPNPEEPEVYEIALRRAASGRPDLILA CCHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE TDPDADRLGVLVRDREGGYRALTGNQIGAILAEQILRSRAEAGTLPANGAVIKTIATSNL ECCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHH VASLCREYGVTLLETHTGFKFIGEKIKEFEETGSHEFLFGFEESYGYLAATFVRDKDAVM HHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCHHHHH AALLVADAAAHHKAEGRTLLDALEAIWQRHGYFQEGLHNVTLPGRDGQARIRSLMAALRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCHHHHHHHHHHHHC DPPRAFAGVPVAYRDDYAAGTGVEVATGRTYPLQLGRAEVLHYRFADGGFVMVRPSGTEP CCCCHHCCCCEEECCCCCCCCCCEEECCCCCEEECCCEEEEEEEECCCCEEEEECCCCCC KLKVYVSVVGADAADAVALRDRVMADALARMGLSGGAGEPAGERIE CEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure STVMERFRLWSEDPYFDEETRRELAGVAGDPREIEDRFYQMLAFGTGGLRGVIGAGTNR CHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHH INRYMVRLATQGLAEALRATGPDALRRGVVIAHDSRRRSAEFAREAAFTLAANGVVAHLW HHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH EGLRPTPMLSFAVRKLGAAAGIVITASHNPPEYNGYKVYWEDGGQVPPDRAGQIQAAMQA CCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH VGDIRSIRPMAEGEARTRGLLRPVPPEVDEAYYSRLLGLVSASPTQRHALRILYTPLHGT HHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCC GLVPVRTVLERAGFPVEVVAEQAEPDPGFPTVAKPNPEEPEVYEIALRRAASGRPDLILA CCHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE TDPDADRLGVLVRDREGGYRALTGNQIGAILAEQILRSRAEAGTLPANGAVIKTIATSNL ECCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHH VASLCREYGVTLLETHTGFKFIGEKIKEFEETGSHEFLFGFEESYGYLAATFVRDKDAVM HHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCHHHHH AALLVADAAAHHKAEGRTLLDALEAIWQRHGYFQEGLHNVTLPGRDGQARIRSLMAALRA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCHHHHHHHHHHHHC DPPRAFAGVPVAYRDDYAAGTGVEVATGRTYPLQLGRAEVLHYRFADGGFVMVRPSGTEP CCCCHHCCCCEEECCCCCCCCCCEEECCCCCEEECCCEEEEEEEECCCCEEEEECCCCCC KLKVYVSVVGADAADAVALRDRVMADALARMGLSGGAGEPAGERIE CEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]