Click here to switch to the map view.

The map label for this gene is nmoT [H]

Identifier: 51893837

GI number: 51893837

Start: 2890021

End: 2891478

Strand: Reverse

Name: nmoT [H]

Synonym: STH2699

Alternate gene names: 51893837

Gene position: 2891478-2890021 (Counterclockwise)

Preceding gene: 51893842

Following gene: 51893836

Centisome position: 81.08

GC content: 61.8

Gene sequence:

>1458_bases
GTGGAAGGGAAATCGCAGCGACAGGTGGCGAAGGCGCTCGGAATCTCTCGGAAAACAGTCGCTAAATACGCACAGCTGAC
TAAAGTGCCGCGCTACCAGCGGCAGAAGCCGGCTCAGCCCGTGGTGCTGACCCCGGAGTTTCAGGCAGAGATCGAGCGGC
GACTCGCGGAAAACGAGATTTTGCCCCGCAAACAACGGTGGACCGGAAGGACTATCTACGAGGACCTGGTTGCCCTGGGC
TACCAGGGCAGCGAACCTACCGTCCGGCGTTACATCGCCAAGATCCGGAAGCTGAAGCGAGTGCAGCCGGCCTTCATCCC
CCTCGCCCACGACCCCGGTGAGAGCATCGAGGTGGATTGGGGTGAGGCGGTAGTGGTCCTCGACGGTGCAGAAGTCACAG
TCCAGATCCTGTGTGTCCGCTTACGTTGGAGCGGCATGCCGGTTGTGATTGCGTATCCGACTCAGCGGCAGGAAGCCATG
TTCGACGGCCTCCGGCGGGCGCTGGAGCGCTTGAGCGGAGTTCCCCGCCGTATGACCCTGGACAACCTGAAGCAGGCGGT
GAAACGAATCCTGGAAGGCCGCAACCGGGAAGAGCAGGATGCCTTCCTGAGCTTCCGCACCCACTACCTCATCGACAGCA
ACTTCTGCAATCCGGCTTCCGGTAACGAGAAAGGCTCGGTAGAGAATCTGGTCGGTCTCGCCCAGCGTTACATCGTCGGG
CCACACCGGGAAGCCAGAACCTGGGACGAACTCAACGCCATTCTGTGGCAGCGGTGCCTGGAGTATGCCAGGCGTATCCC
CCAGGGCTCGACGCAGTCCATCCTGGAGCGCTGGGAGGAGGAGAAGAAGTACCTGCGCCCTCTCCCTGCCCGGCCATTCG
ATTGCTGCAAGGTGGCGCTGGTTTCCAGCAACAAGGTGTCCTGCGTGACGTTCGAGACCTGCCGCTACTCCGTACCGGTT
CAGTATGCGAACCGGCCACTGCAAGTGCGGGCCTACTGGGACCGGATCGACATTTACGCCGGGCAGGAGAAGATTGCCAG
TCATCTCCGTTGCTACGAGCGCAACCGGGAGATCCTCGATCTGGACCACTACCTGGAACTCCTTCACGTAAAGCCAGGGG
CGCTAGAGCAGGCGAAACCCTACCGGATGGCGCAGCTTCCGCCCGTTTACCACCAGTTCCGGGCCGAGATGCAGGCGCAG
GGCCGCAGTGACCGGGAGTTCATCGAGATCCTTATGCTGCACCGCGCCTATTCGGTTTCAGAGGTAAGTACCGCTCTGGA
GCTGGCCCTGGCCCAGCGAACGGCTTGCTACACGGCTGTCAAGCAACTCCTTGCTGTTCAGCCGGATCTTGGAGCCGAGG
CATCGACCTCCACCGCCGGGGAACTGGCCGGCATTCGGGTCCAGCAACCCTCACTGGCCGAGTACAACCGGCTCCTGAAA
GGGGGTGTGGTGCATTGA

Upstream 100 bases:

>100_bases
CCAAACCTGTAAACTGGGATGTACCGCATTTCCAGTTTGCAGGGGTGAAAGGATGAAGATCGAGATGGCTCATGTTGAGC
GTATCAGATGGCTCCTTCAT

Downstream 100 bases:

>100_bases
GCCAGGAACTCCTGCTGGACTACTACCTGAAGCGCCTGAAACTCCCCACAGTCCGGCGGCTGTACAAGGAGCTGGCGCGG
GATGCAGCAGAGCACAACAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MEGKSQRQVAKALGISRKTVAKYAQLTKVPRYQRQKPAQPVVLTPEFQAEIERRLAENEILPRKQRWTGRTIYEDLVALG
YQGSEPTVRRYIAKIRKLKRVQPAFIPLAHDPGESIEVDWGEAVVVLDGAEVTVQILCVRLRWSGMPVVIAYPTQRQEAM
FDGLRRALERLSGVPRRMTLDNLKQAVKRILEGRNREEQDAFLSFRTHYLIDSNFCNPASGNEKGSVENLVGLAQRYIVG
PHREARTWDELNAILWQRCLEYARRIPQGSTQSILERWEEEKKYLRPLPARPFDCCKVALVSSNKVSCVTFETCRYSVPV
QYANRPLQVRAYWDRIDIYAGQEKIASHLRCYERNREILDLDHYLELLHVKPGALEQAKPYRMAQLPPVYHQFRAEMQAQ
GRSDREFIEILMLHRAYSVSEVSTALELALAQRTACYTAVKQLLAVQPDLGAEASTSTAGELAGIRVQQPSLAEYNRLLK
GGVVH

Sequences:

>Translated_485_residues
MEGKSQRQVAKALGISRKTVAKYAQLTKVPRYQRQKPAQPVVLTPEFQAEIERRLAENEILPRKQRWTGRTIYEDLVALG
YQGSEPTVRRYIAKIRKLKRVQPAFIPLAHDPGESIEVDWGEAVVVLDGAEVTVQILCVRLRWSGMPVVIAYPTQRQEAM
FDGLRRALERLSGVPRRMTLDNLKQAVKRILEGRNREEQDAFLSFRTHYLIDSNFCNPASGNEKGSVENLVGLAQRYIVG
PHREARTWDELNAILWQRCLEYARRIPQGSTQSILERWEEEKKYLRPLPARPFDCCKVALVSSNKVSCVTFETCRYSVPV
QYANRPLQVRAYWDRIDIYAGQEKIASHLRCYERNREILDLDHYLELLHVKPGALEQAKPYRMAQLPPVYHQFRAEMQAQ
GRSDREFIEILMLHRAYSVSEVSTALELALAQRTACYTAVKQLLAVQPDLGAEASTSTAGELAGIRVQQPSLAEYNRLLK
GGVVH
>Mature_485_residues
MEGKSQRQVAKALGISRKTVAKYAQLTKVPRYQRQKPAQPVVLTPEFQAEIERRLAENEILPRKQRWTGRTIYEDLVALG
YQGSEPTVRRYIAKIRKLKRVQPAFIPLAHDPGESIEVDWGEAVVVLDGAEVTVQILCVRLRWSGMPVVIAYPTQRQEAM
FDGLRRALERLSGVPRRMTLDNLKQAVKRILEGRNREEQDAFLSFRTHYLIDSNFCNPASGNEKGSVENLVGLAQRYIVG
PHREARTWDELNAILWQRCLEYARRIPQGSTQSILERWEEEKKYLRPLPARPFDCCKVALVSSNKVSCVTFETCRYSVPV
QYANRPLQVRAYWDRIDIYAGQEKIASHLRCYERNREILDLDHYLELLHVKPGALEQAKPYRMAQLPPVYHQFRAEMQAQ
GRSDREFIEILMLHRAYSVSEVSTALELALAQRTACYTAVKQLLAVQPDLGAEASTSTAGELAGIRVQQPSLAEYNRLLK
GGVVH

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 55510; Mature: 55510

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGKSQRQVAKALGISRKTVAKYAQLTKVPRYQRQKPAQPVVLTPEFQAEIERRLAENEI
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCEEECCHHHHHHHHHHHHHCC
LPRKQRWTGRTIYEDLVALGYQGSEPTVRRYIAKIRKLKRVQPAFIPLAHDPGESIEVDW
CCCHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEC
GEAVVVLDGAEVTVQILCVRLRWSGMPVVIAYPTQRQEAMFDGLRRALERLSGVPRRMTL
CCEEEEECCCHHEEHHHEEHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCH
DNLKQAVKRILEGRNREEQDAFLSFRTHYLIDSNFCNPASGNEKGSVENLVGLAQRYIVG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
PHREARTWDELNAILWQRCLEYARRIPQGSTQSILERWEEEKKYLRPLPARPFDCCKVAL
CCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEE
VSSNKVSCVTFETCRYSVPVQYANRPLQVRAYWDRIDIYAGQEKIASHLRCYERNREILD
ECCCCEEEEEEECCCEECCHHHCCCCEEEEEEECHHEEECCHHHHHHHHHHHHHCCCEEC
LDHYLELLHVKPGALEQAKPYRMAQLPPVYHQFRAEMQAQGRSDREFIEILMLHRAYSVS
HHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EVSTALELALAQRTACYTAVKQLLAVQPDLGAEASTSTAGELAGIRVQQPSLAEYNRLLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCHHHHHHHHH
GGVVH
CCCCC
>Mature Secondary Structure
MEGKSQRQVAKALGISRKTVAKYAQLTKVPRYQRQKPAQPVVLTPEFQAEIERRLAENEI
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCEEECCHHHHHHHHHHHHHCC
LPRKQRWTGRTIYEDLVALGYQGSEPTVRRYIAKIRKLKRVQPAFIPLAHDPGESIEVDW
CCCHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEC
GEAVVVLDGAEVTVQILCVRLRWSGMPVVIAYPTQRQEAMFDGLRRALERLSGVPRRMTL
CCEEEEECCCHHEEHHHEEHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCH
DNLKQAVKRILEGRNREEQDAFLSFRTHYLIDSNFCNPASGNEKGSVENLVGLAQRYIVG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
PHREARTWDELNAILWQRCLEYARRIPQGSTQSILERWEEEKKYLRPLPARPFDCCKVAL
CCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEE
VSSNKVSCVTFETCRYSVPVQYANRPLQVRAYWDRIDIYAGQEKIASHLRCYERNREILD
ECCCCEEEEEEECCCEECCHHHCCCCEEEEEEECHHEEECCHHHHHHHHHHHHHCCCEEC
LDHYLELLHVKPGALEQAKPYRMAQLPPVYHQFRAEMQAQGRSDREFIEILMLHRAYSVS
HHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EVSTALELALAQRTACYTAVKQLLAVQPDLGAEASTSTAGELAGIRVQQPSLAEYNRLLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCHHHHHHHHH
GGVVH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]