Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is cmk2 [H]
Identifier: 51599070
GI number: 51599070
Start: 867810
End: 868346
Strand: Direct
Name: cmk2 [H]
Synonym: BG0844
Alternate gene names: 51599070
Gene position: 867810-868346 (Clockwise)
Preceding gene: 51599069
Following gene: 51599071
Centisome position: 95.97
GC content: 29.05
Gene sequence:
>537_bases ATGAAAATAGCACTTTCTGGTAAGAGTGGTTGTGGTAACACTACTGTAAGTAGCATGATTGCAAAACATTATGGTCTTGA GTTTATTAATTACACTTTTCATGATATTGCAAGAGAGCGTAATATTCCTTTTTCAGAGTTTTATGAGAAAGAGATAATAG GAAGAGATGATTATTATTGGGATATGTATCTTGATAAGAGATTGTCTTTACTTTCTAAAAAAAACAATACAGTGCTTGCT TCTCGTCTTGCTATTTGGATTTCTAAGAGCGCTGATTTAAAAATATATCTTTATGCTAAAATGGAAGTCAGAGCCGAGAG AATAATGACTAGAGAGGGGGGGATGTATTCTGATGTTTTAAGCAGTACTTTTAATAGGGATGAAAATGATAAAAAAAGAT ATTTATCTATTTACAATATAGATATTGATGATTATTCTTCAAAGACCGATTTAGTGATTGATGTTACAAATATTAATTCA AATGAAGTTTTTGAATTAATTCGAGATGAAATTGATAAAAGAAACTTAAAAAATTAG
Upstream 100 bases:
>100_bases CAACTATGAGTAATAAGGCGGTTGATCTTGATATTAAAAATTTGATTTTAAATATGAAGTTAAATTTAGAAAAAATAAAA GAGCAAATAAGGAATGTTGA
Downstream 100 bases:
>100_bases CTAAACATATTAAATAATTTTAGTTTATAAGGAGATTAAATGACTAAAGTGCCTTTAAAAAAAATCCAAGATTTTGATGG AAATTTTTATGAACTTGTTG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK 2; Cytidine monophosphate kinase 2; CMP kinase 2 [H]
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKIALSGKSGCGNTTVSSMIAKHYGLEFINYTFHDIARERNIPFSEFYEKEIIGRDDYYWDMYLDKRLSLLSKKNNTVLA SRLAIWISKSADLKIYLYAKMEVRAERIMTREGGMYSDVLSSTFNRDENDKKRYLSIYNIDIDDYSSKTDLVIDVTNINS NEVFELIRDEIDKRNLKN
Sequences:
>Translated_178_residues MKIALSGKSGCGNTTVSSMIAKHYGLEFINYTFHDIARERNIPFSEFYEKEIIGRDDYYWDMYLDKRLSLLSKKNNTVLA SRLAIWISKSADLKIYLYAKMEVRAERIMTREGGMYSDVLSSTFNRDENDKKRYLSIYNIDIDDYSSKTDLVIDVTNINS NEVFELIRDEIDKRNLKN >Mature_178_residues MKIALSGKSGCGNTTVSSMIAKHYGLEFINYTFHDIARERNIPFSEFYEKEIIGRDDYYWDMYLDKRLSLLSKKNNTVLA SRLAIWISKSADLKIYLYAKMEVRAERIMTREGGMYSDVLSSTFNRDENDKKRYLSIYNIDIDDYSSKTDLVIDVTNINS NEVFELIRDEIDKRNLKN
Specific function: Unknown
COG id: COG1102
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011892 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 20850; Mature: 20850
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALSGKSGCGNTTVSSMIAKHYGLEFINYTFHDIARERNIPFSEFYEKEIIGRDDYYW CEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEE DMYLDKRLSLLSKKNNTVLASRLAIWISKSADLKIYLYAKMEVRAERIMTREGGMYSDVL HHHHHHHHHHHHCCCCEEHHHHEEEEEECCCCEEEEEEEEEHHHHHHHHHCCCCHHHHHH SSTFNRDENDKKRYLSIYNIDIDDYSSKTDLVIDVTNINSNEVFELIRDEIDKRNLKN HHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIALSGKSGCGNTTVSSMIAKHYGLEFINYTFHDIARERNIPFSEFYEKEIIGRDDYYW CEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEE DMYLDKRLSLLSKKNNTVLASRLAIWISKSADLKIYLYAKMEVRAERIMTREGGMYSDVL HHHHHHHHHHHHCCCCEEHHHHEEEEEECCCCEEEEEEEEEHHHHHHHHHCCCCHHHHHH SSTFNRDENDKKRYLSIYNIDIDDYSSKTDLVIDVTNINSNEVFELIRDEIDKRNLKN HHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]