Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51599059
Identifier: 51599059
GI number: 51599059
Start: 854376
End: 855665
Strand: Direct
Name: 51599059
Synonym: BG0833
Alternate gene names: NA
Gene position: 854376-855665 (Clockwise)
Preceding gene: 51599058
Following gene: 51599060
Centisome position: 94.48
GC content: 22.64
Gene sequence:
>1290_bases ATGAAAATATTAAAAAACAGTTATGAGTCTTACATAATTTCTGAATTTTTTAAATATTTTTTAATTACTTTTTTATTTTT CTTTTTCGTATTTTTTATAAATCAAATTTTATTCTTTATGAGAATACTTCTTCAAAATTATGTTCCCTTTTTAAAAGCTT TTATTTTTATCATATATTCTCTTCCTATGGTAATTGCGCTTTCTCCTCCTTTTGCTTCTTTGATTTCAGTAATTCTTACT ATTCATAAATTTAAGATTAATAATGAAATTTTAGCTTTTCGTTCAATTGGGATATCAATTTTTGATTTGATTTTCCCATT TTTTAAATTAGGAATAGTTATTGTTTTTATATCTTTTATATCTAATGATATTTTACTTCCACTTGGATCTATTGGTAGGT TAAAAATTTTTAATGAAATAAAAGAAGAAGTTCCCCATTTGGTATTAAAACCCTATTCAAGTAAACAATATGGAGATTTA ATTTTTGTTTCTGGTGAGAAATCGGAAAATGGTTATAAAAATGTAACTTTTTTTGATAACACTAGGCTTAAGGGATTTGA TAGAATATTTATGGCAAAAAATCTTGATATTAAAAAAGAAAATTTTCAAGTTTATTTTATTTTAAATGATGTTATATCTA TTGCTTTAACAGATAGCGAGAGTGGATTTTATGATTATTTTTATGCAGATAAGATGAAATATTCAATCGATCAGGTTACA TTTAGTGATAGTTTTTTATTAAATTATGTAACTCCTTCGCAAATGAGCATGAGAGATGTTATAAAATTAATTAGAAAGCA AAATAATTTAATTGCAGATTCAAATATAAGAAATAATCTAGAAGGGGACTTTTTAAGTTTAAATTTTTCAAATCTTTATT TAAATCATTTATACAATCAAAACTATTATATTGATGAGTCTTATGTCTTTGAAAATTTAGACTACATATATAATTTAAAT TTAAATTTTAAACCCTATCAAGATAAAAGCATGAACCAAAATTTAGCTTTGTTTAATCTTGAATTTTATCAAAAAATTAG TTTGCCACTTTCAGTTTTATTTTTCATTTTTTTAGCTTTTTCAATGGGAATGTATTCTAATAGGAAATATTCTATTATTC TTGAGCTTGTAATTTCAATTATTATTTGTGTTTTTTATTGGGTAATGTTTATTGGTGGAAAAGTTTATACTGTTCAGTAT GCACCAAATCCCATTATTATTACCATTTTGCCTAATTTGATTTTAATTATTGCAGGAGCAATTCTCTTTTTGAGATTATT AAAAAAATGA
Upstream 100 bases:
>100_bases GGACCTAATAATGGACTTCTTAATTTGAATTTAATAAAAGTTTCTAGGTTTGAAAATTATGTTATACTGGGTACTCTTAA TAACGGTTTGGTTTTTGTAG
Downstream 100 bases:
>100_bases AAATAGATATGCTCTTTGTAAAAAGCATCATTCTTACTTTTTTATCCATGAACTTGCTTTTCATGATTTTAATTATACTT GGCGATTTATTTGTTAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKILKNSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYSLPMVIALSPPFASLISVILT IHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFISNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDL IFVSGEKSENGYKNVTFFDNTRLKGFDRIFMAKNLDIKKENFQVYFILNDVISIALTDSESGFYDYFYADKMKYSIDQVT FSDSFLLNYVTPSQMSMRDVIKLIRKQNNLIADSNIRNNLEGDFLSLNFSNLYLNHLYNQNYYIDESYVFENLDYIYNLN LNFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIICVFYWVMFIGGKVYTVQY APNPIIITILPNLILIIAGAILFLRLLKK
Sequences:
>Translated_429_residues MKILKNSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYSLPMVIALSPPFASLISVILT IHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFISNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDL IFVSGEKSENGYKNVTFFDNTRLKGFDRIFMAKNLDIKKENFQVYFILNDVISIALTDSESGFYDYFYADKMKYSIDQVT FSDSFLLNYVTPSQMSMRDVIKLIRKQNNLIADSNIRNNLEGDFLSLNFSNLYLNHLYNQNYYIDESYVFENLDYIYNLN LNFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIICVFYWVMFIGGKVYTVQY APNPIIITILPNLILIIAGAILFLRLLKK >Mature_429_residues MKILKNSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYSLPMVIALSPPFASLISVILT IHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFISNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDL IFVSGEKSENGYKNVTFFDNTRLKGFDRIFMAKNLDIKKENFQVYFILNDVISIALTDSESGFYDYFYADKMKYSIDQVT FSDSFLLNYVTPSQMSMRDVIKLIRKQNNLIADSNIRNNLEGDFLSLNFSNLYLNHLYNQNYYIDESYVFENLDYIYNLN LNFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAFSMGMYSNRKYSIILELVISIIICVFYWVMFIGGKVYTVQY APNPIIITILPNLILIIAGAILFLRLLKK
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50414; Mature: 50414
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKNSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPMVIALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFI HHHHEEECCCHHHHHHHHHHHHHEEECCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHH SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDLIFVSGEKSENGYKNVTFFDN CCCCEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECC TRLKGFDRIFMAKNLDIKKENFQVYFILNDVISIALTDSESGFYDYFYADKMKYSIDQVT CCCCCHHHHHEECCCCEECCCEEEEEEECCEEEEEEECCCCCCEEEEECCCHHEEHHEEE FSDSFLLNYVTPSQMSMRDVIKLIRKQNNLIADSNIRNNLEGDFLSLNFSNLYLNHLYNQ ECCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHCCC NYYIDESYVFENLDYIYNLNLNFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAF CEEECHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHH SMGMYSNRKYSIILELVISIIICVFYWVMFIGGKVYTVQYAPNPIIITILPNLILIIAGA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHH ILFLRLLKK HHHHHHHCC >Mature Secondary Structure MKILKNSYESYIISEFFKYFLITFLFFFFVFFINQILFFMRILLQNYVPFLKAFIFIIYS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPMVIALSPPFASLISVILTIHKFKINNEILAFRSIGISIFDLIFPFFKLGIVIVFISFI HHHHEEECCCHHHHHHHHHHHHHEEECCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHH SNDILLPLGSIGRLKIFNEIKEEVPHLVLKPYSSKQYGDLIFVSGEKSENGYKNVTFFDN CCCCEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECC TRLKGFDRIFMAKNLDIKKENFQVYFILNDVISIALTDSESGFYDYFYADKMKYSIDQVT CCCCCHHHHHEECCCCEECCCEEEEEEECCEEEEEEECCCCCCEEEEECCCHHEEHHEEE FSDSFLLNYVTPSQMSMRDVIKLIRKQNNLIADSNIRNNLEGDFLSLNFSNLYLNHLYNQ ECCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHCCC NYYIDESYVFENLDYIYNLNLNFKPYQDKSMNQNLALFNLEFYQKISLPLSVLFFIFLAF CEEECHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHH SMGMYSNRKYSIILELVISIIICVFYWVMFIGGKVYTVQYAPNPIIITILPNLILIIAGA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHH ILFLRLLKK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA