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The map label for this gene is rimP [H]

Identifier: 51599051

GI number: 51599051

Start: 844476

End: 844913

Strand: Direct

Name: rimP [H]

Synonym: BG0825

Alternate gene names: 51599051

Gene position: 844476-844913 (Clockwise)

Preceding gene: 51599050

Following gene: 51599052

Centisome position: 93.39

GC content: 23.29

Gene sequence:

>438_bases
TTGATTAAATGTTTTGACAAAAATAATGAAGTTTATAATTTGATAAAAAATTTAACAGAACGTTTAAATATTGAAATATT
AGAAGTTAATATTTTTAGAAATAAAAATGGTGGAAAAATTCAAATAGTTCTTTATAGTAAAGATTTTTCTTTAGGTATTG
ATTTGCTGACTGATTTACATAAGATGATTTTATTAATTTTGGAAGCAAGTCTTGAATATAGTTTTACTTTGGAACTTTCT
ACACCAGGAATAGACAGAAGAATAAAAAGTGATAGAGAGTTCCAAATTTTTGAAGGTAAAAAGATTAAGTTAATGTTAGA
CAATGAATTTGAAGAGGGTTTTATATTAGAATCGAAATCAAAAAGTTTTATTTTTAAAACAGAAAGCAAAGAATTAAATG
TTTCTTATAGCGATGTTAAGAAGGCCAGATTAGTTTAA

Upstream 100 bases:

>100_bases
TGTTGACATTATTTTTTCTAAGTGTTAACCTTGATTTAAGGTTTAGTTATGTATTTAATAAGGTTCTTTTAAAAGAACCT
TATTATTTTTAGGAATGTAT

Downstream 100 bases:

>100_bases
GGAGGAACTTTGGATGATAAAGGGCACGGGACATATGATTGTAAGTATTGCAAATGATCGCAGTATGAGTATAGAGTCTA
TTAGAAAAACAATTAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIKCFDKNNEVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLHKMILLILEASLEYSFTLELS
TPGIDRRIKSDREFQIFEGKKIKLMLDNEFEEGFILESKSKSFIFKTESKELNVSYSDVKKARLV

Sequences:

>Translated_145_residues
MIKCFDKNNEVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLHKMILLILEASLEYSFTLELS
TPGIDRRIKSDREFQIFEGKKIKLMLDNEFEEGFILESKSKSFIFKTESKELNVSYSDVKKARLV
>Mature_145_residues
MIKCFDKNNEVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLHKMILLILEASLEYSFTLELS
TPGIDRRIKSDREFQIFEGKKIKLMLDNEFEEGFILESKSKSFIFKTESKELNVSYSDVKKARLV

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 16948; Mature: 16948

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKCFDKNNEVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLH
CEEEECCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHH
KMILLILEASLEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDNEFEEGFILESKS
HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEECCC
KSFIFKTESKELNVSYSDVKKARLV
CEEEEEECCCEEECCHHHHHHCCCC
>Mature Secondary Structure
MIKCFDKNNEVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLH
CEEEECCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHH
KMILLILEASLEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDNEFEEGFILESKS
HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEECCC
KSFIFKTESKELNVSYSDVKKARLV
CEEEEEECCCEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA