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The map label for this gene is omp85 [H]

Identifier: 51599047

GI number: 51599047

Start: 837959

End: 840424

Strand: Direct

Name: omp85 [H]

Synonym: BG0821

Alternate gene names: 51599047

Gene position: 837959-840424 (Clockwise)

Preceding gene: 51599046

Following gene: 51599048

Centisome position: 92.67

GC content: 29.08

Gene sequence:

>2466_bases
ATGGGTTCAATTAGAGGTTTGGTTTTTATAAGTTTTTTAATGGTTTTTGCGGTTTTTAGTTTTGGTCAAGTTGAAAATTA
CAAAGGGAAAGTAATAAAGGCTATTAATTTTGAAGGCCTTAAGAATAAGAAAGAGATGGATTTTATTAATATTTTGAAAC
CTTATATTGGTATGGCATATTCTAATGAAATTTTTGATAAATTGCAAATTGATCTTTATTCTCTTGATTATTTTTCTGGG
CTTATTAAGCCTATATTTAAAATAGATGGTGAGGATCTTTTTATCACATTTATTGTAAAAGAAAAATCTTTAGTTAATTC
TGTTGTTTTTTCTGATAGTAGTAGAGTTTTTTGGAATAGTGAACTTGTCGAAAAGGTAAATATTAAGACTAATGAGCCTT
TTAATCTTGCAAGTGTTAATAAAGGTATTGACAAGCTTGAAGAGATGTATAAAAATATGGGATATTTTGAGGTTTCTGCA
AATTTTGAAATTAAAGAAGAAGGAAATTTAGTTGATATTATTTTTAATATAGCAGCCGGACCTAAATATATTATTAAAGG
AATTGATTTTGAGGGAAATTTAAGCTTTAAAAGTAGCACTTTGAGAAAATCTTTAGCATCAAGAGTAGTATCTCTTTTCT
CAGATGGTAAATATTTAAAAAGTAATATTGATAAGGATAAGCGGCAATTAGAGTCTTTTTATAAAAATAATGGGTATATT
GATATTAAGATTATAAATAGCACTGTTGATATTAAAGATTCTCTTAAAGATTCTCAAAGGTTAGAAAAGGAAGTTTTTTT
GAAATATTTTATTTCAGAAGGCAATGTTTTTAAATTTGGAAAGCTTGAAATTTTTGGCAATTCGGTTTTTAGCTTAGAAG
AATTAAAAAGTTTTATTACCTTTAGGGAAGGTGATATTTTTAATAATTCTAAATTTGAGCAGGATTTTACCAAAATTAAG
GAAAGTTACTTTAAGGAAGGGTATATTTTTACAGAAATTATTCCTTCACAAAAGATAAGAGGGGAGTTTGTTGATTTTTT
AATTAAAATTTCAGAAAAGGATAAAGCTCATATTGAATCTATTACTGTTTCTAAAAATAAAAATACAGCTTCGCATGTAA
TACTTAGGGAGATTCCTCTTCAAGAGGGAGATGTTTTTAGTTTGGATAAGTTTAAGATCGGCATGGTTAATTTACAGCAG
CTTGGTTATTTTTCAAACGTAATCCCCGATATTGTTCCAAGTAATACGGAAGGGCTTATGAAAATAAATTTAAACATTGA
GGAGCGAGCAACAAGTAATTTTGGATTTGGTATGAATTTTGGAGGCAATTCAAATTCTTCCTTTCCATTCTCAATATTTG
GGCAATGGGAGCTTTCTAATTTTTTGAGCGAAGGATATTATTTTGCTGCAAGGTTAAATTTATCTTTTTTAGAGCAAAGT
CTTAGTTTGACATTTAGAGATAATTGGTTTTTTCAAAAAAGATGGACTGTGGGTGGATTTGTAGACTTTTCACATTCTGT
TAATACTGCTTATCAAGATATTAATGGGCCTATTTTTTCTGGTAAAAGGGAAGTTCCTGATCCATTTACAAGTTGGGAAG
AATATCGAGATGCTAAAAGCTTTTCCGATTTTAATGCGATGAATTATTCTTTGCTTAAACTTAGTTTTGGAGGGTTTACA
GGGTATACTTTTTCTAATTATCTTGGCAAACAAACTATTCTTGGCACTTTGCAAACCGCTTTAAAATATGTTTTTTATGA
TAATGAGGTTAACAGACCTTCAAATTATTATTTAAGAGATAATTACAAAACTTTGAGATTTGAAAATTCTCTTAGTTTGA
GCGCAGCTTGGGATACAAGAAATTCTACTTCTTTATCTAATAATGGATTTTTGCTTAAACAGCAGTTTGATTTTTTCGGC
GGATTTTTATTTGGCCAGAGTCATTTTGTTAAATCTGCTACAACCTTTGAGAGATATTTTTCTCTCTTAGGGTATGAGGA
CGTGTTTACTCCTTATTTTGATATTATTTTAACCCTAAGGAGCGTCTATTCAAATATACTTCCTCCTCTTGGTAATGGTT
TTGAAATTGAAATTCAACCCCATCATCACATAGTCCTTAGTGAAAATTTTATGCAGGCTAGAGGTTGGGGGATTTTGAAA
AATATTTACAGTTCCTTTGTAAATACTGTGCAAATATCTATTCCTTTGTTAAAAAATATTTTAGTTTGGGATGTTTTTTT
TATAGATTTTGCTTCCTATTCTTTAGAAGGGCAAGAAAATTCTTTATTTAGACCTTTTAGTAGTTTTGCTTTTAGCTGGG
GAACTGGAATCAGAAGTCTTTTGCCTCAGTTACCACTGTCTTTTGTAATAGCTTATCCTTTTTATTTTGATAATGATACA
GTTAACAGTTATTACAAATATTTTTCTGGATTTAAATTTTTCTTAGGAATTGAGATGAGATATTGA

Upstream 100 bases:

>100_bases
ATGAGTTTGATTACAATTTTATGAAAAAAGGTTTAGATGGGATAGGAAATAATATAGGTATTTCTTGGAAATTTAAATAT
TAAATTGTTAAGAGGTTAAG

Downstream 100 bases:

>100_bases
TATAATACTATGGAGAAATTTGTGTTTTTTTTGATTTTACCATTGTTTTTTTTATTATCTTTTAATGTTTTTTCGATAGA
TGTTATTAAAATAGGCATTG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 821; Mature: 820

Protein sequence:

>821_residues
MGSIRGLVFISFLMVFAVFSFGQVENYKGKVIKAINFEGLKNKKEMDFINILKPYIGMAYSNEIFDKLQIDLYSLDYFSG
LIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNSELVEKVNIKTNEPFNLASVNKGIDKLEEMYKNMGYFEVSA
NFEIKEEGNLVDIIFNIAAGPKYIIKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNIDKDKRQLESFYKNNGYI
DIKIINSTVDIKDSLKDSQRLEKEVFLKYFISEGNVFKFGKLEIFGNSVFSLEELKSFITFREGDIFNNSKFEQDFTKIK
ESYFKEGYIFTEIIPSQKIRGEFVDFLIKISEKDKAHIESITVSKNKNTASHVILREIPLQEGDVFSLDKFKIGMVNLQQ
LGYFSNVIPDIVPSNTEGLMKINLNIEERATSNFGFGMNFGGNSNSSFPFSIFGQWELSNFLSEGYYFAARLNLSFLEQS
LSLTFRDNWFFQKRWTVGGFVDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKSFSDFNAMNYSLLKLSFGGFT
GYTFSNYLGKQTILGTLQTALKYVFYDNEVNRPSNYYLRDNYKTLRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFG
GFLFGQSHFVKSATTFERYFSLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIVLSENFMQARGWGILK
NIYSSFVNTVQISIPLLKNILVWDVFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSLLPQLPLSFVIAYPFYFDNDT
VNSYYKYFSGFKFFLGIEMRY

Sequences:

>Translated_821_residues
MGSIRGLVFISFLMVFAVFSFGQVENYKGKVIKAINFEGLKNKKEMDFINILKPYIGMAYSNEIFDKLQIDLYSLDYFSG
LIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNSELVEKVNIKTNEPFNLASVNKGIDKLEEMYKNMGYFEVSA
NFEIKEEGNLVDIIFNIAAGPKYIIKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNIDKDKRQLESFYKNNGYI
DIKIINSTVDIKDSLKDSQRLEKEVFLKYFISEGNVFKFGKLEIFGNSVFSLEELKSFITFREGDIFNNSKFEQDFTKIK
ESYFKEGYIFTEIIPSQKIRGEFVDFLIKISEKDKAHIESITVSKNKNTASHVILREIPLQEGDVFSLDKFKIGMVNLQQ
LGYFSNVIPDIVPSNTEGLMKINLNIEERATSNFGFGMNFGGNSNSSFPFSIFGQWELSNFLSEGYYFAARLNLSFLEQS
LSLTFRDNWFFQKRWTVGGFVDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKSFSDFNAMNYSLLKLSFGGFT
GYTFSNYLGKQTILGTLQTALKYVFYDNEVNRPSNYYLRDNYKTLRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFG
GFLFGQSHFVKSATTFERYFSLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIVLSENFMQARGWGILK
NIYSSFVNTVQISIPLLKNILVWDVFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSLLPQLPLSFVIAYPFYFDNDT
VNSYYKYFSGFKFFLGIEMRY
>Mature_820_residues
GSIRGLVFISFLMVFAVFSFGQVENYKGKVIKAINFEGLKNKKEMDFINILKPYIGMAYSNEIFDKLQIDLYSLDYFSGL
IKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNSELVEKVNIKTNEPFNLASVNKGIDKLEEMYKNMGYFEVSAN
FEIKEEGNLVDIIFNIAAGPKYIIKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNIDKDKRQLESFYKNNGYID
IKIINSTVDIKDSLKDSQRLEKEVFLKYFISEGNVFKFGKLEIFGNSVFSLEELKSFITFREGDIFNNSKFEQDFTKIKE
SYFKEGYIFTEIIPSQKIRGEFVDFLIKISEKDKAHIESITVSKNKNTASHVILREIPLQEGDVFSLDKFKIGMVNLQQL
GYFSNVIPDIVPSNTEGLMKINLNIEERATSNFGFGMNFGGNSNSSFPFSIFGQWELSNFLSEGYYFAARLNLSFLEQSL
SLTFRDNWFFQKRWTVGGFVDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKSFSDFNAMNYSLLKLSFGGFTG
YTFSNYLGKQTILGTLQTALKYVFYDNEVNRPSNYYLRDNYKTLRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFGG
FLFGQSHFVKSATTFERYFSLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIVLSENFMQARGWGILKN
IYSSFVNTVQISIPLLKNILVWDVFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSLLPQLPLSFVIAYPFYFDNDTV
NSYYKYFSGFKFFLGIEMRY

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=474, Percent_Identity=22.7848101265823, Blast_Score=103, Evalue=6e-23,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 94666; Mature: 94534

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSIRGLVFISFLMVFAVFSFGQVENYKGKVIKAINFEGLKNKKEMDFINILKPYIGMAY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHH
SNEIFDKLQIDLYSLDYFSGLIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNS
CHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCCCCEEECH
ELVEKVNIKTNEPFNLASVNKGIDKLEEMYKNMGYFEVSANFEIKEEGNLVDIIFNIAAG
HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEECCCC
PKYIIKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNIDKDKRQLESFYKNNGYI
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCEE
DIKIINSTVDIKDSLKDSQRLEKEVFLKYFISEGNVFKFGKLEIFGNSVFSLEELKSFIT
EEEEECCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHH
FREGDIFNNSKFEQDFTKIKESYFKEGYIFTEIIPSQKIRGEFVDFLIKISEKDKAHIES
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEECCCCCCCEEE
ITVSKNKNTASHVILREIPLQEGDVFSLDKFKIGMVNLQQLGYFSNVIPDIVPSNTEGLM
EEEECCCCHHHHEEEEECCCCCCCEEEECCEEEEEEEHHHHHHHHHHCCCCCCCCCCCEE
KINLNIEERATSNFGFGMNFGGNSNSSFPFSIFGQWELSNFLSEGYYFAARLNLSFLEQS
EEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCEEEEEECCHHHHHHH
LSLTFRDNWFFQKRWTVGGFVDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKS
HCEEEECCEEEEEECCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCC
FSDFNAMNYSLLKLSFGGFTGYTFSNYLGKQTILGTLQTALKYVFYDNEVNRPSNYYLRD
CCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEC
NYKTLRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFGGFLFGQSHFVKSATTFERYF
CCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHH
SLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIVLSENFMQARGWGILK
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCHHHHCCCHHHH
NIYSSFVNTVQISIPLLKNILVWDVFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSL
HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH
LPQLPLSFVIAYPFYFDNDTVNSYYKYFSGFKFFLGIEMRY
HHHCCCEEEEEECEEECCCCHHHHHHHHCCEEEEEEEEECC
>Mature Secondary Structure 
GSIRGLVFISFLMVFAVFSFGQVENYKGKVIKAINFEGLKNKKEMDFINILKPYIGMAY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHH
SNEIFDKLQIDLYSLDYFSGLIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNS
CHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCCCCEEECH
ELVEKVNIKTNEPFNLASVNKGIDKLEEMYKNMGYFEVSANFEIKEEGNLVDIIFNIAAG
HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEECCCC
PKYIIKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNIDKDKRQLESFYKNNGYI
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCEE
DIKIINSTVDIKDSLKDSQRLEKEVFLKYFISEGNVFKFGKLEIFGNSVFSLEELKSFIT
EEEEECCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHH
FREGDIFNNSKFEQDFTKIKESYFKEGYIFTEIIPSQKIRGEFVDFLIKISEKDKAHIES
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEECCCCCCCEEE
ITVSKNKNTASHVILREIPLQEGDVFSLDKFKIGMVNLQQLGYFSNVIPDIVPSNTEGLM
EEEECCCCHHHHEEEEECCCCCCCEEEECCEEEEEEEHHHHHHHHHHCCCCCCCCCCCEE
KINLNIEERATSNFGFGMNFGGNSNSSFPFSIFGQWELSNFLSEGYYFAARLNLSFLEQS
EEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCEEEEEECCHHHHHHH
LSLTFRDNWFFQKRWTVGGFVDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKS
HCEEEECCEEEEEECCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCC
FSDFNAMNYSLLKLSFGGFTGYTFSNYLGKQTILGTLQTALKYVFYDNEVNRPSNYYLRD
CCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEC
NYKTLRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFGGFLFGQSHFVKSATTFERYF
CCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHH
SLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIVLSENFMQARGWGILK
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCHHHHCCCHHHH
NIYSSFVNTVQISIPLLKNILVWDVFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSL
HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHH
LPQLPLSFVIAYPFYFDNDTVNSYYKYFSGFKFFLGIEMRY
HHHCCCEEEEEECEEECCCCHHHHHHHHCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]