Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is ybeB [C]
Identifier: 51599035
GI number: 51599035
Start: 824221
End: 824571
Strand: Direct
Name: ybeB [C]
Synonym: BG0808
Alternate gene names: 51599035
Gene position: 824221-824571 (Clockwise)
Preceding gene: 51599034
Following gene: 51599036
Centisome position: 91.15
GC content: 25.36
Gene sequence:
>351_bases ATGGAAGATATGTTAAAAGTAAATGATATTAATACTTTATGTAAAATAATAACCGATTTTAATGGAATTGACGTTATAGG TATTAATGTTAGCAATATTTGCAATTGGACTGATTTTTTTATAATAGCTACTTTTGTATCATTTAAACAAATGGAAGCTT TGTATCATGATAAGATAGTTAAATTTTTTAAAGAAAGAAAAATTAATCTTAACGTTCAAGGAAAAGGATTGGTTTATGAC TGGACTGTTGTTTCGGGTGGAAATTTAGTAATTCATTTAATGAGCGAAAAGTCTAGAGAATACTATGAACTTGAAAAAAT ATGGTCCAAAGGAATTATTATTTATCCTTAA
Upstream 100 bases:
>100_bases AATATTAAGCCAATTTCTGAAGTTCAAACTAAAAGATTATTAGAGCTTGATAATCTTGATATTAATCCTGATGTAATAGT TGTTTTAGGAGATGATTTTA
Downstream 100 bases:
>100_bases TCGCTGTTTAATTAAAAAAACTAAAAATATCATAAAAATATGTTTACAAAAAATAGAAAATATTTTAGATTTAAGTTATG TACTTTTTGCGGGAGGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Iojap-Related Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MEDMLKVNDINTLCKIITDFNGIDVIGINVSNICNWTDFFIIATFVSFKQMEALYHDKIVKFFKERKINLNVQGKGLVYD WTVVSGGNLVIHLMSEKSREYYELEKIWSKGIIIYP
Sequences:
>Translated_116_residues MEDMLKVNDINTLCKIITDFNGIDVIGINVSNICNWTDFFIIATFVSFKQMEALYHDKIVKFFKERKINLNVQGKGLVYD WTVVSGGNLVIHLMSEKSREYYELEKIWSKGIIIYP >Mature_116_residues MEDMLKVNDINTLCKIITDFNGIDVIGINVSNICNWTDFFIIATFVSFKQMEALYHDKIVKFFKERKINLNVQGKGLVYD WTVVSGGNLVIHLMSEKSREYYELEKIWSKGIIIYP
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923977, Length=104, Percent_Identity=34.6153846153846, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87081768, Length=93, Percent_Identity=34.4086021505376, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13517; Mature: 13517
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDMLKVNDINTLCKIITDFNGIDVIGINVSNICNWTDFFIIATFVSFKQMEALYHDKIV CCCCEECCCHHHHHHHHCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KFFKERKINLNVQGKGLVYDWTVVSGGNLVIHLMSEKSREYYELEKIWSKGIIIYP HHHHHCCEEEEECCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCEEEEC >Mature Secondary Structure MEDMLKVNDINTLCKIITDFNGIDVIGINVSNICNWTDFFIIATFVSFKQMEALYHDKIV CCCCEECCCHHHHHHHHCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KFFKERKINLNVQGKGLVYDWTVVSGGNLVIHLMSEKSREYYELEKIWSKGIIIYP HHHHHCCEEEEECCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA