Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51599034
Identifier: 51599034
GI number: 51599034
Start: 823062
End: 824246
Strand: Direct
Name: 51599034
Synonym: BG0807
Alternate gene names: NA
Gene position: 823062-824246 (Clockwise)
Preceding gene: 51599033
Following gene: 51599035
Centisome position: 91.02
GC content: 24.47
Gene sequence:
>1185_bases TTGCGAAAGGATTTAATTTTTTTAGTTTTAATCGTTTTAATAATAGCGAGTGTAGTAATTTTTTTTATTAGAAGCTCTAA AAAAGAGCTAGTTTACTTCGAGCTTAATACAAAGAACAATATTAGTTTTTTGTTTTTAGTAGAAGATCTTAATAAAAACC TTGTAAGCATGCAAGAAATTTTTATTAATATAAAAACAGGAAATCTTGGTTTTTTAGATATTCCAATCCATACTGGATAT GAAGATTTAAAAGGCAATATATCTTGGTTTAAAGATCTTTATAAAAAGAATTCTTTTACTAAGTTTTTGTCTAAAATTCA TACGCAATTATCTCATGAATCAGATTATTATATTCGTTTTCAAAAAGAAAATTTTGTTAAACTTATTGATTACTTGGGAG GTGTTAGACTTCTTGTTAAAAATCCAGTAAAAGTTTATAGTTTTGAGGATTCTATTTTAATACCCTCTGGTACTTCTAAT TTTGATGGTGATAAAGCTTATGATTATTTAAGATATTTTAATGATGTTAATCAGTTTGAAGAGAGAGTTGAGTTTTTTAA AGAGTTTTTTAAAAAACTTCTTTTTCAAATTTCAGATTTTGGTATTGAAAATGACAATTTTTTCAAAATATATTCCATGA TAGATACTAATCTTTCAGAGGTTGTTTTTAAGTATATTTTTAAAAATTATAAAATCAATAATGATAAAATTATTTCTATT AATATTAAAGGGCAAGAAGAGATTTTTAAGGATAATCATAATAATTTGATAAAAGTTGTTCTTCCAGAATATGGGGGCGC TATTTTAAAAGAATCGGTGGATAAATTGAATAAAGAGTTGGTTAATGAAGGCCCAGAAGAGATAGTAAAGATTGTCGTTT TAAATGGAACAAAAGTTGCTGGACTTGCAAAAAAAACAGCAAATATTTTTAATTCTTTAAAATTTAAAGTTTTAAATTTT GACAATGCAGATAAAAATTCTTATAAAAATACCTTGATTATTAATAATTCGGATAATTTAGAAATGGCTGTTAGAGTTGG CGAGGTAATTAAAGCTACAAATATTAAGCCAATTTCTGAAGTTCAAACTAAAAGATTATTAGAGCTTGATAATCTTGATA TTAATCCTGATGTAATAGTTGTTTTAGGAGATGATTTTAATGGAAGATATGTTAAAAGTAAATGA
Upstream 100 bases:
>100_bases GAAATAGAATTGCAAATGGACTTCCTGTTAGCTATTTACTACCCTGTAGTGTGTTAAAATACATTAAAGATAATAATTTA TATGTTAAAAAGGTAAATAT
Downstream 100 bases:
>100_bases TATTAATACTTTATGTAAAATAATAACCGATTTTAATGGAATTGACGTTATAGGTATTAATGTTAGCAATATTTGCAATT GGACTGATTTTTTTATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDLNKNLVSMQEIFINIKTGNLGFLDIPIHTGY EDLKGNISWFKDLYKKNSFTKFLSKIHTQLSHESDYYIRFQKENFVKLIDYLGGVRLLVKNPVKVYSFEDSILIPSGTSN FDGDKAYDYLRYFNDVNQFEERVEFFKEFFKKLLFQISDFGIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISI NIKGQEEIFKDNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVAGLAKKTANIFNSLKFKVLNF DNADKNSYKNTLIINNSDNLEMAVRVGEVIKATNIKPISEVQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK
Sequences:
>Translated_394_residues MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDLNKNLVSMQEIFINIKTGNLGFLDIPIHTGY EDLKGNISWFKDLYKKNSFTKFLSKIHTQLSHESDYYIRFQKENFVKLIDYLGGVRLLVKNPVKVYSFEDSILIPSGTSN FDGDKAYDYLRYFNDVNQFEERVEFFKEFFKKLLFQISDFGIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISI NIKGQEEIFKDNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVAGLAKKTANIFNSLKFKVLNF DNADKNSYKNTLIINNSDNLEMAVRVGEVIKATNIKPISEVQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK >Mature_394_residues MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDLNKNLVSMQEIFINIKTGNLGFLDIPIHTGY EDLKGNISWFKDLYKKNSFTKFLSKIHTQLSHESDYYIRFQKENFVKLIDYLGGVRLLVKNPVKVYSFEDSILIPSGTSN FDGDKAYDYLRYFNDVNQFEERVEFFKEFFKKLLFQISDFGIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISI NIKGQEEIFKDNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVAGLAKKTANIFNSLKFKVLNF DNADKNSYKNTLIINNSDNLEMAVRVGEVIKATNIKPISEVQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK
Specific function: Unknown
COG id: COG1316
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45654; Mature: 45654
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDLNKNLVSMQEI CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCHHHEEEEE FINIKTGNLGFLDIPIHTGYEDLKGNISWFKDLYKKNSFTKFLSKIHTQLSHESDYYIRF EEEEEECCEEEEEEECCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEE QKENFVKLIDYLGGVRLLVKNPVKVYSFEDSILIPSGTSNFDGDKAYDYLRYFNDVNQFE CCCHHHHHHHHHCCEEEEECCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH ERVEFFKEFFKKLLFQISDFGIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISI HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCHHHHHHHHHHHCCEECCCEEEEE NIKGQEEIFKDNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVA EECCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCEEH GLAKKTANIFNSLKFKVLNFDNADKNSYKNTLIINNSDNLEMAVRVGEVIKATNIKPISE HHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCHHH VQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK HHHHHHHHHCCCCCCCCEEEEECCCCCCCEECCC >Mature Secondary Structure MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDLNKNLVSMQEI CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCHHHEEEEE FINIKTGNLGFLDIPIHTGYEDLKGNISWFKDLYKKNSFTKFLSKIHTQLSHESDYYIRF EEEEEECCEEEEEEECCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEE QKENFVKLIDYLGGVRLLVKNPVKVYSFEDSILIPSGTSNFDGDKAYDYLRYFNDVNQFE CCCHHHHHHHHHCCEEEEECCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH ERVEFFKEFFKKLLFQISDFGIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISI HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCHHHHHHHHHHHCCEECCCEEEEE NIKGQEEIFKDNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVA EECCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCEEH GLAKKTANIFNSLKFKVLNFDNADKNSYKNTLIINNSDNLEMAVRVGEVIKATNIKPISE HHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCHHH VQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK HHHHHHHHHCCCCCCCCEEEEECCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA