Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598994
Identifier: 51598994
GI number: 51598994
Start: 787131
End: 788786
Strand: Direct
Name: 51598994
Synonym: BG0764
Alternate gene names: NA
Gene position: 787131-788786 (Clockwise)
Preceding gene: 51598993
Following gene: 51598995
Centisome position: 87.05
GC content: 27.84
Gene sequence:
>1656_bases TTGTTTTCAGCTTCTTTTTTAAGGCTTTATTCTAGCATTAATTTATATTTTCAAAAAGCATTAACTGGTAAAGTTGTAGG CAATCCAATTATTGATGAAAAACGTGATACTATTACGGTTTTAACAAAAGATAGATGGTTGATTACTTATACAATGTCAT TTGAGAAGAAATATTCTTATAGATTGAATAGAATTCCATATCCTTTTCTTTTAAAAGATTTTGATAATGGTTATTATGTT ATTACAGCTAAAAATGAAGTTCAAAAGATTGAAAGAGGAAAGCTTGTTTGGAAGCATAAGCTTGATTTTTCACCTTTAGG CGATCCTGCCATAGGGAATGTTAGCATTTTAATTCCCCTTATTAATGAGAGGGTTGTTTCTATTGATTTAAAGAGTGGAA AAAAGATATTTGAAGTTGACATAGGTGGCAAACCCGCTACTTCTCCTGTAGTTTTTGATAATGGTGATTTTTGCATCGCA AGCGAAAATGATGAAATATTTTTGTTTGATTTTTTGGGTAATAAGAAATGGTTTTCAAGGCTGGTTGCTTTCCCTTTTTT GTTAATGATAAATACAAAAAAAGAGGTAGTTGTTGGACATAAGTCAGGTCATATTGTTGCTTATGGGAGAGATTTTGGGG AAGTTGTTAACTCTATTAAATTAGACTTTCCTATTAATTTTTTGTTTGAAAAGTTTAATGGTGAATATGTCGCAATTTCA AGTGTTGGTATGTTTTTTAATTTAAGTAGAAACTTTAAGCTTAAATTTAAAAAAAAAATGAACTTTAAGCCTGAGAAAGC TGTTCTTTATAACAATAGAAATCTTTTAATTTCAACTAAATCAAATGGACTTTTGTCTTTTGAAGAAGATTTTGATATAT CTTTCACAGATTCTAAACTTAAGGATTTGTTGGGACTTAGTGCTAATTCAGGTATTATTGTCTTAGGGGGTAGTGATTGG GTTCTTAGTACTTATTATTATGAGTACGACAAAGAGTTTGATGTTAGCGTGTGGAACCATTTTAGAGGTAATAAATACAA TCAAGGTAGAATAGATTTAAAAGAGAAAGGCTCTGTAGATTATGATGAAAATTATTTACTTCTTGATGAGATTCTTAATT CTAGTTATAGTCATTCTGCTTATGATAAATTTTTAGGTATTTTAGATTTTCTTGCAACTAAAGATGGAAATTTCCCCAAA AAATATTTAAATTTATATAAAAAGGCTTTTAATGTTTGGCTTTTGCCAGAAAAGGGACTTGATAGAATTATTTCAAGGGG CAAGCTTTATAGATATTTTATATATGTTAATGATGAATTTGCAATTAAGAGCTTTATTGATTTGGCAATTAGAGAAAGAG ATATTAATAATATAATTGCCATAGTGAAAACCATTACCAAATTTGAAAGTTATTATGGGCAAGATTGTATTATATATAAT TACATCCAGCATATAGTGTTAAATTATCAAGGTAATTTAGAAATAGCTTATTCTGTAATTTTAAATTTGAGAAATATAAT TTTAAATTCAACAGACAAGCTTCTTACGCTTTGTAAGCATAAGTATCTAAATTTATTAATGTTTATGAGGCGGCAAAATT TTTCTGAAAATATTAACAAGCACATTAATGAAATTATTTCAATCATTCAAGATTGA
Upstream 100 bases:
>100_bases GAAATAACCTTTATGGTGATAATGCTGGGTTTAGGCTTTAGTGGTAGTTTTTTAAAAGCTCAAAAGGTTTTTTGTTTTGA GAGGCTTACTTTTTATATTT
Downstream 100 bases:
>100_bases AATAGCTGTTTTGTATATAAATCTGATTATGTTAAAATTAAGTTTAAATTAGTGAATTTAGTTGGCAAGGTAGATTATAA TTAAGTTTATAGGAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MFSASFLRLYSSINLYFQKALTGKVVGNPIIDEKRDTITVLTKDRWLITYTMSFEKKYSYRLNRIPYPFLLKDFDNGYYV ITAKNEVQKIERGKLVWKHKLDFSPLGDPAIGNVSILIPLINERVVSIDLKSGKKIFEVDIGGKPATSPVVFDNGDFCIA SENDEIFLFDFLGNKKWFSRLVAFPFLLMINTKKEVVVGHKSGHIVAYGRDFGEVVNSIKLDFPINFLFEKFNGEYVAIS SVGMFFNLSRNFKLKFKKKMNFKPEKAVLYNNRNLLISTKSNGLLSFEEDFDISFTDSKLKDLLGLSANSGIIVLGGSDW VLSTYYYEYDKEFDVSVWNHFRGNKYNQGRIDLKEKGSVDYDENYLLLDEILNSSYSHSAYDKFLGILDFLATKDGNFPK KYLNLYKKAFNVWLLPEKGLDRIISRGKLYRYFIYVNDEFAIKSFIDLAIRERDINNIIAIVKTITKFESYYGQDCIIYN YIQHIVLNYQGNLEIAYSVILNLRNIILNSTDKLLTLCKHKYLNLLMFMRRQNFSENINKHINEIISIIQD
Sequences:
>Translated_551_residues MFSASFLRLYSSINLYFQKALTGKVVGNPIIDEKRDTITVLTKDRWLITYTMSFEKKYSYRLNRIPYPFLLKDFDNGYYV ITAKNEVQKIERGKLVWKHKLDFSPLGDPAIGNVSILIPLINERVVSIDLKSGKKIFEVDIGGKPATSPVVFDNGDFCIA SENDEIFLFDFLGNKKWFSRLVAFPFLLMINTKKEVVVGHKSGHIVAYGRDFGEVVNSIKLDFPINFLFEKFNGEYVAIS SVGMFFNLSRNFKLKFKKKMNFKPEKAVLYNNRNLLISTKSNGLLSFEEDFDISFTDSKLKDLLGLSANSGIIVLGGSDW VLSTYYYEYDKEFDVSVWNHFRGNKYNQGRIDLKEKGSVDYDENYLLLDEILNSSYSHSAYDKFLGILDFLATKDGNFPK KYLNLYKKAFNVWLLPEKGLDRIISRGKLYRYFIYVNDEFAIKSFIDLAIRERDINNIIAIVKTITKFESYYGQDCIIYN YIQHIVLNYQGNLEIAYSVILNLRNIILNSTDKLLTLCKHKYLNLLMFMRRQNFSENINKHINEIISIIQD >Mature_551_residues MFSASFLRLYSSINLYFQKALTGKVVGNPIIDEKRDTITVLTKDRWLITYTMSFEKKYSYRLNRIPYPFLLKDFDNGYYV ITAKNEVQKIERGKLVWKHKLDFSPLGDPAIGNVSILIPLINERVVSIDLKSGKKIFEVDIGGKPATSPVVFDNGDFCIA SENDEIFLFDFLGNKKWFSRLVAFPFLLMINTKKEVVVGHKSGHIVAYGRDFGEVVNSIKLDFPINFLFEKFNGEYVAIS SVGMFFNLSRNFKLKFKKKMNFKPEKAVLYNNRNLLISTKSNGLLSFEEDFDISFTDSKLKDLLGLSANSGIIVLGGSDW VLSTYYYEYDKEFDVSVWNHFRGNKYNQGRIDLKEKGSVDYDENYLLLDEILNSSYSHSAYDKFLGILDFLATKDGNFPK KYLNLYKKAFNVWLLPEKGLDRIISRGKLYRYFIYVNDEFAIKSFIDLAIRERDINNIIAIVKTITKFESYYGQDCIIYN YIQHIVLNYQGNLEIAYSVILNLRNIILNSTDKLLTLCKHKYLNLLMFMRRQNFSENINKHINEIISIIQD
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64035; Mature: 64035
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSASFLRLYSSINLYFQKALTGKVVGNPIIDEKRDTITVLTKDRWLITYTMSFEKKYSY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCC RLNRIPYPFLLKDFDNGYYVITAKNEVQKIERGKLVWKHKLDFSPLGDPAIGNVSILIPL HHCCCCCCEEEEECCCCEEEEEECHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEE INERVVSIDLKSGKKIFEVDIGGKPATSPVVFDNGDFCIASENDEIFLFDFLGNKKWFSR CCCEEEEEEECCCCEEEEEECCCCCCCCCEEECCCCEEEECCCCCEEEEEECCCHHHHHH LVAFPFLLMINTKKEVVVGHKSGHIVAYGRDFGEVVNSIKLDFPINFLFEKFNGEYVAIS HHHHHEEEEEECCCEEEEEECCCEEEEECCHHHHHHHHEEECCCHHHHHHHCCCCEEEEE SVGMFFNLSRNFKLKFKKKMNFKPEKAVLYNNRNLLISTKSNGLLSFEEDFDISFTDSKL ECEEEEEECCCEEEEEEECCCCCCCEEEEEECCEEEEEECCCCEEEECCCCCEEECHHHH KDLLGLSANSGIIVLGGSDWVLSTYYYEYDKEFDVSVWNHFRGNKYNQGRIDLKEKGSVD HHHHCCCCCCCEEEECCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCEEEECCCCCCC YDENYLLLDEILNSSYSHSAYDKFLGILDFLATKDGNFPKKYLNLYKKAFNVWLLPEKGL CCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCHHHH DRIISRGKLYRYFIYVNDEFAIKSFIDLAIRERDINNIIAIVKTITKFESYYGQDCIIYN HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHH YIQHIVLNYQGNLEIAYSVILNLRNIILNSTDKLLTLCKHKYLNLLMFMRRQNFSENINK HHHHHEEECCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH HINEIISIIQD HHHHHHHHHCC >Mature Secondary Structure MFSASFLRLYSSINLYFQKALTGKVVGNPIIDEKRDTITVLTKDRWLITYTMSFEKKYSY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCC RLNRIPYPFLLKDFDNGYYVITAKNEVQKIERGKLVWKHKLDFSPLGDPAIGNVSILIPL HHCCCCCCEEEEECCCCEEEEEECHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEE INERVVSIDLKSGKKIFEVDIGGKPATSPVVFDNGDFCIASENDEIFLFDFLGNKKWFSR CCCEEEEEEECCCCEEEEEECCCCCCCCCEEECCCCEEEECCCCCEEEEEECCCHHHHHH LVAFPFLLMINTKKEVVVGHKSGHIVAYGRDFGEVVNSIKLDFPINFLFEKFNGEYVAIS HHHHHEEEEEECCCEEEEEECCCEEEEECCHHHHHHHHEEECCCHHHHHHHCCCCEEEEE SVGMFFNLSRNFKLKFKKKMNFKPEKAVLYNNRNLLISTKSNGLLSFEEDFDISFTDSKL ECEEEEEECCCEEEEEEECCCCCCCEEEEEECCEEEEEECCCCEEEECCCCCEEECHHHH KDLLGLSANSGIIVLGGSDWVLSTYYYEYDKEFDVSVWNHFRGNKYNQGRIDLKEKGSVD HHHHCCCCCCCEEEECCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCEEEECCCCCCC YDENYLLLDEILNSSYSHSAYDKFLGILDFLATKDGNFPKKYLNLYKKAFNVWLLPEKGL CCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCHHHH DRIISRGKLYRYFIYVNDEFAIKSFIDLAIRERDINNIIAIVKTITKFESYYGQDCIIYN HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHH YIQHIVLNYQGNLEIAYSVILNLRNIILNSTDKLLTLCKHKYLNLLMFMRRQNFSENINK HHHHHEEECCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH HINEIISIIQD HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA