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The map label for this gene is ykpA [H]

Identifier: 51598993

GI number: 51598993

Start: 785440

End: 787071

Strand: Direct

Name: ykpA [H]

Synonym: BG0763

Alternate gene names: 51598993

Gene position: 785440-787071 (Clockwise)

Preceding gene: 51598989

Following gene: 51598994

Centisome position: 86.86

GC content: 31.68

Gene sequence:

>1632_bases
TTGATAACTGTAAATAATTTGGAAGTTGCATTTGGAGAGCGAGTTTTATTTAAAGATGTAAATATTAAATTTTCTTCTGG
AAATTGTTATGGAATAATTGGTGCTAATGGAGCAGGAAAAAGCACTTTTTTAAAAGTGCTAGGTGGAATGATTGAATCTA
CTAAGGGTGAAATATTTATTCCAAAAAATCAAAGAGTAGCGGCTCTTGAGCAAGATCAATTTGCTTATGATGCATATAAG
GTTATCGATACTGTTATTATGGGTCACAAAAGGCTTTATTCTATTCAAAAAGAAAAAGATGAAATTTATAATAAACTTGA
TTTTAGTGATGAGGATGGGATTAGAGCCGGGGAGCTTGAAGCAGAATTTTCAGAACTTGGAGGATACGAGGCTGAATCTA
GTGCGGCAGTTCTTCTTAAGGGTCTTGGAATAGATGAGTCAATTCATAATAATTTAATGGGTGACATTGAAGGGTCTTTA
AAGGTTCGAGTTCTTTTGGCGCAAGCGCTTTTTGGTGAACCTGATATATTGCTTCTTGATGAGCCTACCAATAATCTTGA
TCTACAATCTATTAAATGGTTGGAAGAGTTTTTAATTAATTTCGAAAATACAGTTATTGTTGTATCTCATGATAGACATT
TTTTAAATCAAGTTTGTACCCATATTGTTGACATTGATTACGGAAAGATTCAAGTGTATCTTGGAAATTATGACTTTTGG
TATGAAACAAGCCAGATTTTAAACAAGCAGCTAAAAGATGCTAAAAAGCGATCTGAAGATAAAATTGCTGAACTTAAGAC
ATTTATTCAAAGATTTTCTAGTAATGCATCTAAGTCTAGGCAAGCAACATCAAGGAAAAAGTTGATTGAAAAAATAAAGG
TTGAAGATTTGAAGCCTTCTTCAAGGAAGTTTCCTTATGTTAATTTCAAAAGCGAAAGAGAACTTGGTAAAAATGTTCTT
ACAATTAAAAATTTGACAAAAGAATTTGAAGGGAATTTAATTTTAAATAAATTTAGCAGTATTATTGAACCCCAACAAAA
GATTGTTTTTTTGGGAAATCCCATGTCTGCAACTTTTTTGTTTGATATTATTACAAATGAAGATAAAAATTATAAAGGTC
ATTATGAATGGGGATCTACTGTTAATTTTTCATATTTTAATAAGGATAATGGGAAATATTTTGATTTGGATTTAAATTTA
GTTAATTGGTTGCGTCAGTATTCAAAAGAACAAGATGAAACTTATATTAGAGGATTTTTAGGTCGAATGCTTTTCAGCCA
AGATGAAGCTTTAAAGAAGGTAAATGTCCTCTCAGGAGGAGAAAAAGTAAGATGCATGCTTGCTAAGGCTATGCTTAGCG
GAGCAAATGTTTTAATACTGGATCAGCCTACAAACCACTTAGATCTTGAAGCAATTACATCTTTAAATGCTGGGCTTAAA
GAATTTAAAGGAGTTGTTCTTTTTACATCGCATGATCATCAATTTATAGATACTGTTGCCAATAGAATTATCGAGTTTAC
TCCCAACGGAATAATTGATCGATATATGACTTTTTCTGAGTATGTTGATGATACTAAGATTAGGGATCTGAGAAATAACC
TTTATGGTGATAATGCTGGGTTTAGGCTTTAG

Upstream 100 bases:

>100_bases
ATTGAGAGTTGAGTCAATATATTTATATAGTGCTTGAAAATTAAATTAATTTTCAAGATAATTTTGTTATTAGAATATTA
ATTTTAGGCAGGGTAATGGT

Downstream 100 bases:

>100_bases
TGGTAGTTTTTTAAAAGCTCAAAAGGTTTTTTGTTTTGAGAGGCTTACTTTTTATATTTTTGTTTTCAGCTTCTTTTTTA
AGGCTTTATTCTAGCATTAA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MITVNNLEVAFGERVLFKDVNIKFSSGNCYGIIGANGAGKSTFLKVLGGMIESTKGEIFIPKNQRVAALEQDQFAYDAYK
VIDTVIMGHKRLYSIQKEKDEIYNKLDFSDEDGIRAGELEAEFSELGGYEAESSAAVLLKGLGIDESIHNNLMGDIEGSL
KVRVLLAQALFGEPDILLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
YETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSRQATSRKKLIEKIKVEDLKPSSRKFPYVNFKSERELGKNVL
TIKNLTKEFEGNLILNKFSSIIEPQQKIVFLGNPMSATFLFDIITNEDKNYKGHYEWGSTVNFSYFNKDNGKYFDLDLNL
VNWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVLILDQPTNHLDLEAITSLNAGLK
EFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDTKIRDLRNNLYGDNAGFRL

Sequences:

>Translated_543_residues
MITVNNLEVAFGERVLFKDVNIKFSSGNCYGIIGANGAGKSTFLKVLGGMIESTKGEIFIPKNQRVAALEQDQFAYDAYK
VIDTVIMGHKRLYSIQKEKDEIYNKLDFSDEDGIRAGELEAEFSELGGYEAESSAAVLLKGLGIDESIHNNLMGDIEGSL
KVRVLLAQALFGEPDILLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
YETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSRQATSRKKLIEKIKVEDLKPSSRKFPYVNFKSERELGKNVL
TIKNLTKEFEGNLILNKFSSIIEPQQKIVFLGNPMSATFLFDIITNEDKNYKGHYEWGSTVNFSYFNKDNGKYFDLDLNL
VNWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVLILDQPTNHLDLEAITSLNAGLK
EFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDTKIRDLRNNLYGDNAGFRL
>Mature_543_residues
MITVNNLEVAFGERVLFKDVNIKFSSGNCYGIIGANGAGKSTFLKVLGGMIESTKGEIFIPKNQRVAALEQDQFAYDAYK
VIDTVIMGHKRLYSIQKEKDEIYNKLDFSDEDGIRAGELEAEFSELGGYEAESSAAVLLKGLGIDESIHNNLMGDIEGSL
KVRVLLAQALFGEPDILLLDEPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
YETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSRQATSRKKLIEKIKVEDLKPSSRKFPYVNFKSERELGKNVL
TIKNLTKEFEGNLILNKFSSIIEPQQKIVFLGNPMSATFLFDIITNEDKNYKGHYEWGSTVNFSYFNKDNGKYFDLDLNL
VNWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVLILDQPTNHLDLEAITSLNAGLK
EFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDTKIRDLRNNLYGDNAGFRL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=29.3457943925234, Blast_Score=238, Evalue=2e-62,
Organism=Homo sapiens, GI10947137, Length=509, Percent_Identity=30.2554027504912, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI27881506, Length=509, Percent_Identity=30.2554027504912, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI10947135, Length=519, Percent_Identity=26.9749518304432, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI69354671, Length=519, Percent_Identity=26.9749518304432, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI105990541, Length=269, Percent_Identity=25.2788104089219, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=44.6768060836502, Blast_Score=491, Evalue=1e-140,
Organism=Escherichia coli, GI1789751, Length=503, Percent_Identity=28.2306163021869, Blast_Score=235, Evalue=6e-63,
Organism=Escherichia coli, GI2367384, Length=542, Percent_Identity=30.0738007380074, Blast_Score=212, Evalue=6e-56,
Organism=Escherichia coli, GI1787182, Length=525, Percent_Identity=27.8095238095238, Blast_Score=193, Evalue=3e-50,
Organism=Escherichia coli, GI1789864, Length=235, Percent_Identity=26.8085106382979, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=25.2100840336134, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1788644, Length=235, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786703, Length=239, Percent_Identity=25.9414225941423, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788506, Length=262, Percent_Identity=22.5190839694656, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=21.6814159292035, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI48994943, Length=234, Percent_Identity=25.2136752136752, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=519, Percent_Identity=30.4431599229287, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=527, Percent_Identity=25.8064516129032, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17555318, Length=548, Percent_Identity=26.0948905109489, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=28.4403669724771, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=553, Percent_Identity=30.5605786618445, Blast_Score=231, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=519, Percent_Identity=31.5992292870906, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6325030, Length=237, Percent_Identity=30.379746835443, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=228, Percent_Identity=27.1929824561404, Blast_Score=89, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323278, Length=229, Percent_Identity=25.3275109170306, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24666836, Length=519, Percent_Identity=32.1772639691715, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24642252, Length=512, Percent_Identity=27.734375, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI18859989, Length=512, Percent_Identity=27.734375, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI24641342, Length=510, Percent_Identity=29.4117647058824, Blast_Score=204, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61885; Mature: 61885

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVNNLEVAFGERVLFKDVNIKFSSGNCYGIIGANGAGKSTFLKVLGGMIESTKGEIFI
CEEECCEEEECCCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEE
PKNQRVAALEQDQFAYDAYKVIDTVIMGHKRLYSIQKEKDEIYNKLDFSDEDGIRAGELE
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
AEFSELGGYEAESSAAVLLKGLGIDESIHNNLMGDIEGSLKVRVLLAQALFGEPDILLLD
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEHHEEHHHHCCCCCEEEEE
EPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCEE
YETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSRQATSRKKLIEKIKVEDLKPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SRKFPYVNFKSERELGKNVLTIKNLTKEFEGNLILNKFSSIIEPQQKIVFLGNPMSATFL
CCCCCEECCCCHHHHCCCEEHHHHHHHHHCCCEEHHHHHHHCCCCCEEEEECCCCCEEEE
FDIITNEDKNYKGHYEWGSTVNFSYFNKDNGKYFDLDLNLVNWLRQYSKEQDETYIRGFL
EEEEECCCCCCCCEECCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHH
GRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVLILDQPTNHLDLEAITSLNAGLK
HHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCHH
EFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDTKIRDLRNNLYGDNAG
HCCCEEEEECCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
FRL
CCC
>Mature Secondary Structure
MITVNNLEVAFGERVLFKDVNIKFSSGNCYGIIGANGAGKSTFLKVLGGMIESTKGEIFI
CEEECCEEEECCCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEE
PKNQRVAALEQDQFAYDAYKVIDTVIMGHKRLYSIQKEKDEIYNKLDFSDEDGIRAGELE
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
AEFSELGGYEAESSAAVLLKGLGIDESIHNNLMGDIEGSLKVRVLLAQALFGEPDILLLD
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEHHEEHHHHCCCCCEEEEE
EPTNNLDLQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCEE
YETSQILNKQLKDAKKRSEDKIAELKTFIQRFSSNASKSRQATSRKKLIEKIKVEDLKPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SRKFPYVNFKSERELGKNVLTIKNLTKEFEGNLILNKFSSIIEPQQKIVFLGNPMSATFL
CCCCCEECCCCHHHHCCCEEHHHHHHHHHCCCEEHHHHHHHCCCCCEEEEECCCCCEEEE
FDIITNEDKNYKGHYEWGSTVNFSYFNKDNGKYFDLDLNLVNWLRQYSKEQDETYIRGFL
EEEEECCCCCCCCEECCCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHH
GRMLFSQDEALKKVNVLSGGEKVRCMLAKAMLSGANVLILDQPTNHLDLEAITSLNAGLK
HHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCHH
EFKGVVLFTSHDHQFIDTVANRIIEFTPNGIIDRYMTFSEYVDDTKIRDLRNNLYGDNAG
HCCCEEEEECCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
FRL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]