Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is mcp-3 [H]
Identifier: 51598850
GI number: 51598850
Start: 620741
End: 622948
Strand: Direct
Name: mcp-3 [H]
Synonym: BG0610
Alternate gene names: 51598850
Gene position: 620741-622948 (Clockwise)
Preceding gene: 51598848
Following gene: 51598852
Centisome position: 68.65
GC content: 26.45
Gene sequence:
>2208_bases ATGACTGATGAGAATTTAATCGATGTTAATCTGAAAAATACTAAACGGTTTCTTTATCTAATTTTATTTGGATTTCTTTT TTTAAACTTTTTATTTATAGGCTATTCTTATATAAATCATAAAAATGAATATTTGGATCGCTTTAAATTTGATGCTAAGT TATTTTTAAACAGCGCTTCTTCTGTTATTAGGGCTAAATATTTGGAATCCTCTAGGTTTCTTGAAGAGTTTATAAAAGAC AGCTATAGGTTTGGGATATTGGTGAATTCTTCAAAGAGCTTTCTTTTGTCTTCAAGTTTAAAATTGGGTGATAATTTAGA TGAAAATAGCGATTTGTTTTTAAAGTCAAGAGAATTTAGCTCTATAGATAAAATTTTTAAAACTATTCCTGTAGCAGAAA ATTCACTAGAAGGTATATTTTATATTCCTATAGGGAAAAATGTTTTAATATCAAATTTAAATTTTTCATCTCTGAGCTTA AAAGATGTTAGACTTGATCCAATTTATTCTGTTCCTGTAGAAAAAAACTTTAAATATTATTCAAGGTTCATGAGAATAGA TGGAAAAATTTATTCTATAGTAAGTTTTCCCGTTAGGGATTCTGTTGCAACATTGGGCGTTATAGGGATTCTAGTATGTT TTGATGAATCGTTTGATATTATTGAAAATCAACTGTATTCTTCTCTTAAATTTAGCAGTAAGGATTATAATTTTTTTATG CTTGATAGAAATTATATGCCCATTTTTTTAAACTTTAATAATCTTAAGGCCAAATCTTTTTCTACATCTTATAGTGAGAA TGTTTTGAACAAAGTTATAGCCTATATTAAAAAAGATTCTTCTGCTTCTCAGCATACTTTTAATTATGAAAGCGATTTTT ATTCTTTAAGCTTTGTAAAAACCGATGATTTTTTGATTCAAGGATTGATTTTTAATGTCAATTCTATTCCTATTATGTTT AAATCAAATTGGGTTGTATTTTTTATATTCTTATTATCATCTTTTGCAATTATATTTTATTTGTGCAATACTTTTATTTT TTCATTAATTAATGATTTTAACAGAATTGTTAATTATCAAAAATCAAAAAGCGATCCTTTTAATCTTGAGCCCCCTTTAG AGGTTAAGTATTCGTCGGCTATTATTTCTTATATTAGTTCAAAGCTGGACAGTATTTCGTCCAAAAGTAACAAATCTTTT GAGAAAATAAAATTTTATTCTGAAGATTTAAATGCTTATTTAGAACAAATAGAAACTGCTATGTTAAATACTGAAAGTAT AGATTCTAGCGTTTTAGCTTACGAGCAACTAAGAGATACTTTTTCTAGATTTGAAAAATCAATTGTTGATATTTTAAGAG GCTTTGAATCTGTTGCTGATCCAATTAATGATCACAATAAGCATATGTCAGAAATCTCCTCAAATTTTGAAGAGAATGTT AGTTTTTTTTATACTATAGATAAAAATTTGGAAATTTTTAATAAAGTTGCTACTACAAATTCTACTGATATTGAAAATAT TAAAAGTAAAGTTCTTGATTTAAATATTGTTTTTGAAAATGTGAATAAAAATTTTGCAGATCTTTTATCTCAAACAAATA GCTTACAAAGTGCAAATAAACTTTTAGTGTCAATTTCAGCTCAGACTAATATGCTTGCTATGAATGCAGCAATTGAAGCA GCAAAAGCAGGCGATGCGGGTAAAAGTTTTGCAGTTGTTGCTGAGGAAATTAGAAAGCTTGCTATTAATTCTGGAAAATA TTCTAAAACCATTAAAGATGAACTTAAAACGGTTGATAGTATTATTGCGGTAATTAATTCAGAGATCGATACAATTTATA AAAATTTTATAGACATTCAAGATAATGTGGACAGCAATTTTTCAAGACACGAGAAAGTAGACCTTACTCTTGCTAAGCAT TTTAAAGAAATTGGTGAGTTTAAAGAAAGGTATTTGTCTCACGATACTAAGATCAGAGATGCTAAGAATATGTATAAAGA AATATTTAATAACCATTTTTTTGTGAGCAGCAAGTTTAACAACTTTAGTCAAGATTTAAAAGAGTTTAAAGTTTCTAAGA TGAATTTAGACGCAATAAGTTCTCTTCAAGAATATTCATCTTTGATGAAATCTTCTAAGGATAAGATATTAAAGATAAAG GAATTGACTCAAAAGATTAATGATGAGATTAAAGATATTATTTTTTAG
Upstream 100 bases:
>100_bases GCTAATTATTATTATTAGTAATTATTTATACATTATTTGTGAAGGTGAAAGTTTTGTTTTAAGGTTTTAATCATATTAAT GTTATGTTTGGAGAGCTTTT
Downstream 100 bases:
>100_bases CTTTTTTGATTTTTAAATCCTATGTAAAGCACTTCTTCTTCGAGTAAAAGTCCAGTTTTCGAGTAGACTTCAGTTTTTAC TTTTTCAATTAAACTCTTTA
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MTDENLIDVNLKNTKRFLYLILFGFLFLNFLFIGYSYINHKNEYLDRFKFDAKLFLNSASSVIRAKYLESSRFLEEFIKD SYRFGILVNSSKSFLLSSSLKLGDNLDENSDLFLKSREFSSIDKIFKTIPVAENSLEGIFYIPIGKNVLISNLNFSSLSL KDVRLDPIYSVPVEKNFKYYSRFMRIDGKIYSIVSFPVRDSVATLGVIGILVCFDESFDIIENQLYSSLKFSSKDYNFFM LDRNYMPIFLNFNNLKAKSFSTSYSENVLNKVIAYIKKDSSASQHTFNYESDFYSLSFVKTDDFLIQGLIFNVNSIPIMF KSNWVVFFIFLLSSFAIIFYLCNTFIFSLINDFNRIVNYQKSKSDPFNLEPPLEVKYSSAIISYISSKLDSISSKSNKSF EKIKFYSEDLNAYLEQIETAMLNTESIDSSVLAYEQLRDTFSRFEKSIVDILRGFESVADPINDHNKHMSEISSNFEENV SFFYTIDKNLEIFNKVATTNSTDIENIKSKVLDLNIVFENVNKNFADLLSQTNSLQSANKLLVSISAQTNMLAMNAAIEA AKAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVDSIIAVINSEIDTIYKNFIDIQDNVDSNFSRHEKVDLTLAKH FKEIGEFKERYLSHDTKIRDAKNMYKEIFNNHFFVSSKFNNFSQDLKEFKVSKMNLDAISSLQEYSSLMKSSKDKILKIK ELTQKINDEIKDIIF
Sequences:
>Translated_735_residues MTDENLIDVNLKNTKRFLYLILFGFLFLNFLFIGYSYINHKNEYLDRFKFDAKLFLNSASSVIRAKYLESSRFLEEFIKD SYRFGILVNSSKSFLLSSSLKLGDNLDENSDLFLKSREFSSIDKIFKTIPVAENSLEGIFYIPIGKNVLISNLNFSSLSL KDVRLDPIYSVPVEKNFKYYSRFMRIDGKIYSIVSFPVRDSVATLGVIGILVCFDESFDIIENQLYSSLKFSSKDYNFFM LDRNYMPIFLNFNNLKAKSFSTSYSENVLNKVIAYIKKDSSASQHTFNYESDFYSLSFVKTDDFLIQGLIFNVNSIPIMF KSNWVVFFIFLLSSFAIIFYLCNTFIFSLINDFNRIVNYQKSKSDPFNLEPPLEVKYSSAIISYISSKLDSISSKSNKSF EKIKFYSEDLNAYLEQIETAMLNTESIDSSVLAYEQLRDTFSRFEKSIVDILRGFESVADPINDHNKHMSEISSNFEENV SFFYTIDKNLEIFNKVATTNSTDIENIKSKVLDLNIVFENVNKNFADLLSQTNSLQSANKLLVSISAQTNMLAMNAAIEA AKAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVDSIIAVINSEIDTIYKNFIDIQDNVDSNFSRHEKVDLTLAKH FKEIGEFKERYLSHDTKIRDAKNMYKEIFNNHFFVSSKFNNFSQDLKEFKVSKMNLDAISSLQEYSSLMKSSKDKILKIK ELTQKINDEIKDIIF >Mature_734_residues TDENLIDVNLKNTKRFLYLILFGFLFLNFLFIGYSYINHKNEYLDRFKFDAKLFLNSASSVIRAKYLESSRFLEEFIKDS YRFGILVNSSKSFLLSSSLKLGDNLDENSDLFLKSREFSSIDKIFKTIPVAENSLEGIFYIPIGKNVLISNLNFSSLSLK DVRLDPIYSVPVEKNFKYYSRFMRIDGKIYSIVSFPVRDSVATLGVIGILVCFDESFDIIENQLYSSLKFSSKDYNFFML DRNYMPIFLNFNNLKAKSFSTSYSENVLNKVIAYIKKDSSASQHTFNYESDFYSLSFVKTDDFLIQGLIFNVNSIPIMFK SNWVVFFIFLLSSFAIIFYLCNTFIFSLINDFNRIVNYQKSKSDPFNLEPPLEVKYSSAIISYISSKLDSISSKSNKSFE KIKFYSEDLNAYLEQIETAMLNTESIDSSVLAYEQLRDTFSRFEKSIVDILRGFESVADPINDHNKHMSEISSNFEENVS FFYTIDKNLEIFNKVATTNSTDIENIKSKVLDLNIVFENVNKNFADLLSQTNSLQSANKLLVSISAQTNMLAMNAAIEAA KAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVDSIIAVINSEIDTIYKNFIDIQDNVDSNFSRHEKVDLTLAKHF KEIGEFKERYLSHDTKIRDAKNMYKEIFNNHFFVSSKFNNFSQDLKEFKVSKMNLDAISSLQEYSSLMKSSKDKILKIKE LTQKINDEIKDIIF
Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1787690, Length=186, Percent_Identity=24.7311827956989, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789453, Length=141, Percent_Identity=30.4964539007092, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788195, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI2367378, Length=197, Percent_Identity=25.8883248730964, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007891 - InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 84718; Mature: 84587
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDENLIDVNLKNTKRFLYLILFGFLFLNFLFIGYSYINHKNEYLDRFKFDAKLFLNSAS CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SVIRAKYLESSRFLEEFIKDSYRFGILVNSSKSFLLSSSLKLGDNLDENSDLFLKSREFS HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCHH SIDKIFKTIPVAENSLEGIFYIPIGKNVLISNLNFSSLSLKDVRLDPIYSVPVEKNFKYY HHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCEEEECEECCCEEECCCCCCHHHH SRFMRIDGKIYSIVSFPVRDSVATLGVIGILVCFDESFDIIENQLYSSLKFSSKDYNFFM HHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE LDRNYMPIFLNFNNLKAKSFSTSYSENVLNKVIAYIKKDSSASQHTFNYESDFYSLSFVK EECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE TDDFLIQGLIFNVNSIPIMFKSNWVVFFIFLLSSFAIIFYLCNTFIFSLINDFNRIVNYQ CHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KSKSDPFNLEPPLEVKYSSAIISYISSKLDSISSKSNKSFEKIKFYSEDLNAYLEQIETA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH MLNTESIDSSVLAYEQLRDTFSRFEKSIVDILRGFESVADPINDHNKHMSEISSNFEENV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCC SFFYTIDKNLEIFNKVATTNSTDIENIKSKVLDLNIVFENVNKNFADLLSQTNSLQSANK EEEEEECCCHHHHHHHHCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHCC LLVSISAQTNMLAMNAAIEAAKAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVDS EEEEEECCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IIAVINSEIDTIYKNFIDIQDNVDSNFSRHEKVDLTLAKHFKEIGEFKERYLSHDTKIRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKNMYKEIFNNHFFVSSKFNNFSQDLKEFKVSKMNLDAISSLQEYSSLMKSSKDKILKIK HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH ELTQKINDEIKDIIF HHHHHHHHHHHHHCC >Mature Secondary Structure TDENLIDVNLKNTKRFLYLILFGFLFLNFLFIGYSYINHKNEYLDRFKFDAKLFLNSAS CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SVIRAKYLESSRFLEEFIKDSYRFGILVNSSKSFLLSSSLKLGDNLDENSDLFLKSREFS HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCHH SIDKIFKTIPVAENSLEGIFYIPIGKNVLISNLNFSSLSLKDVRLDPIYSVPVEKNFKYY HHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCEEEECEECCCEEECCCCCCHHHH SRFMRIDGKIYSIVSFPVRDSVATLGVIGILVCFDESFDIIENQLYSSLKFSSKDYNFFM HHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE LDRNYMPIFLNFNNLKAKSFSTSYSENVLNKVIAYIKKDSSASQHTFNYESDFYSLSFVK EECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE TDDFLIQGLIFNVNSIPIMFKSNWVVFFIFLLSSFAIIFYLCNTFIFSLINDFNRIVNYQ CHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KSKSDPFNLEPPLEVKYSSAIISYISSKLDSISSKSNKSFEKIKFYSEDLNAYLEQIETA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH MLNTESIDSSVLAYEQLRDTFSRFEKSIVDILRGFESVADPINDHNKHMSEISSNFEENV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCC SFFYTIDKNLEIFNKVATTNSTDIENIKSKVLDLNIVFENVNKNFADLLSQTNSLQSANK EEEEEECCCHHHHHHHHCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHCC LLVSISAQTNMLAMNAAIEAAKAGDAGKSFAVVAEEIRKLAINSGKYSKTIKDELKTVDS EEEEEECCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IIAVINSEIDTIYKNFIDIQDNVDSNFSRHEKVDLTLAKHFKEIGEFKERYLSHDTKIRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKNMYKEIFNNHFFVSSKFNNFSQDLKEFKVSKMNLDAISSLQEYSSLMKSSKDKILKIK HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH ELTQKINDEIKDIIF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]