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The map label for this gene is lgtD [H]

Identifier: 51598823

GI number: 51598823

Start: 587026

End: 588090

Strand: Direct

Name: lgtD [H]

Synonym: BG0583

Alternate gene names: 51598823

Gene position: 587026-588090 (Clockwise)

Preceding gene: 51598821

Following gene: 51598824

Centisome position: 64.92

GC content: 26.67

Gene sequence:

>1065_bases
GTGCATAAGTGTAAAGTTTCTGTTATTATTTGTTTTTTTAATTCGGCTGAAACTCTTGATGCAATGATAAAGGACGCTGT
TAATCAAACATTAAAAGATAAAGAAATTATATTAATTAACGATGGTTCTTATGATAGTAGTTTAGAGATAGCAGAAAAAT
ATGCTAATAAGTATAGCTTTATTAAGATTTTTAGTCAAAAAAATATGGGGCTTCCTGCTTCTAGAGACAAGGGACTTTCT
GAGGCCCAAGGGGAATATGTTATTTATTGGGATAGTGATGATTCTGTAGAGAGTACTATGCTTGAAGTTTTATATAATAG
GGCAAAGGCAGATAATTCTGATATTGTTTGTTCTCAATTTTATGTTTATTTTCTTGCAATAAATGTAAAAAGAAAATCCC
TTCTTCCTTTCCCCAATTACCCATTGACAGGTAAGGAGGCTTTTAAAAATTTGTTTTTTACTGTTTATGCGACTTTTGGA
AGGAAAAATTTTGTTGTTGGAACGTTATGGGATAAATTGATTAGACGAGAATTGATCTTAAAGAATAATATTCGTCAGCA
AAATGTAGTATTTGAAGATATAGTTTTTGTTATGCAAATTTTTTTAAAAGCCTCTAAGGTTTCTTTTGTAAATAATTATT
TTTATACTAATTTCCAAAGAATGGGAAGCATGAGCTCTTCTATTAGTGTTTTGCATAAAGCTAAATTATCTCTTAATACA
ATAGAAACTTTATTGAAAAAAGAAGGCATTTTAAACGAATATCAACATTTGTATAAAAGATTTTTTTTGCAATTTTATTA
TTTTATTTCTTTTAAGCAAATTTATATTATTAGCTGGAATATTTCCGATAAGCTTGTTTATAGGGCTTACAAAGAAAAGC
TTATTTCTGTTCTTGATGAGATTAAAGGATTATCTGAATTTCAAGATTATTATGAATATGCAAAAAATTTTGGATTTAAC
GAAATTCAAATTTTACCTAGAATTATGTTGAAAATTTGGAATTTTAGCTCAAGACTTTATGTAAATTTTTCTATATTTAT
TTATAAGTTGTTTATAAAGAATTGA

Upstream 100 bases:

>100_bases
TTACAATTTAATTGTTATGCTAAAAATTAAAAGAATTTGTTGTTAAGTGTTTTAGCTTTAGCTTCGGTTTTACTTAGCAG
TTTTTATTTTGGAGGATATT

Downstream 100 bases:

>100_bases
ATTTATATTTTTGGAATAATTAATTTTTTTTATATTTTGACCTTTAATATTAAGGAGTATTTATGGCTATTGAAGTTTCT
AATGTGAAATTTTCTTATAA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MHKCKVSVIICFFNSAETLDAMIKDAVNQTLKDKEIILINDGSYDSSLEIAEKYANKYSFIKIFSQKNMGLPASRDKGLS
EAQGEYVIYWDSDDSVESTMLEVLYNRAKADNSDIVCSQFYVYFLAINVKRKSLLPFPNYPLTGKEAFKNLFFTVYATFG
RKNFVVGTLWDKLIRRELILKNNIRQQNVVFEDIVFVMQIFLKASKVSFVNNYFYTNFQRMGSMSSSISVLHKAKLSLNT
IETLLKKEGILNEYQHLYKRFFLQFYYFISFKQIYIISWNISDKLVYRAYKEKLISVLDEIKGLSEFQDYYEYAKNFGFN
EIQILPRIMLKIWNFSSRLYVNFSIFIYKLFIKN

Sequences:

>Translated_354_residues
MHKCKVSVIICFFNSAETLDAMIKDAVNQTLKDKEIILINDGSYDSSLEIAEKYANKYSFIKIFSQKNMGLPASRDKGLS
EAQGEYVIYWDSDDSVESTMLEVLYNRAKADNSDIVCSQFYVYFLAINVKRKSLLPFPNYPLTGKEAFKNLFFTVYATFG
RKNFVVGTLWDKLIRRELILKNNIRQQNVVFEDIVFVMQIFLKASKVSFVNNYFYTNFQRMGSMSSSISVLHKAKLSLNT
IETLLKKEGILNEYQHLYKRFFLQFYYFISFKQIYIISWNISDKLVYRAYKEKLISVLDEIKGLSEFQDYYEYAKNFGFN
EIQILPRIMLKIWNFSSRLYVNFSIFIYKLFIKN
>Mature_354_residues
MHKCKVSVIICFFNSAETLDAMIKDAVNQTLKDKEIILINDGSYDSSLEIAEKYANKYSFIKIFSQKNMGLPASRDKGLS
EAQGEYVIYWDSDDSVESTMLEVLYNRAKADNSDIVCSQFYVYFLAINVKRKSLLPFPNYPLTGKEAFKNLFFTVYATFG
RKNFVVGTLWDKLIRRELILKNNIRQQNVVFEDIVFVMQIFLKASKVSFVNNYFYTNFQRMGSMSSSISVLHKAKLSLNT
IETLLKKEGILNEYQHLYKRFFLQFYYFISFKQIYIISWNISDKLVYRAYKEKLISVLDEIKGLSEFQDYYEYAKNFGFN
EIQILPRIMLKIWNFSSRLYVNFSIFIYKLFIKN

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=235, Percent_Identity=29.3617021276596, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41747; Mature: 41747

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKCKVSVIICFFNSAETLDAMIKDAVNQTLKDKEIILINDGSYDSSLEIAEKYANKYSF
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEE
IKIFSQKNMGLPASRDKGLSEAQGEYVIYWDSDDSVESTMLEVLYNRAKADNSDIVCSQF
EEEEECCCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
YVYFLAINVKRKSLLPFPNYPLTGKEAFKNLFFTVYATFGRKNFVVGTLWDKLIRRELIL
HHHHHEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
KNNIRQQNVVFEDIVFVMQIFLKASKVSFVNNYFYTNFQRMGSMSSSISVLHKAKLSLNT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IETLLKKEGILNEYQHLYKRFFLQFYYFISFKQIYIISWNISDKLVYRAYKEKLISVLDE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
IKGLSEFQDYYEYAKNFGFNEIQILPRIMLKIWNFSSRLYVNFSIFIYKLFIKN
HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHEEEEEEECCC
>Mature Secondary Structure
MHKCKVSVIICFFNSAETLDAMIKDAVNQTLKDKEIILINDGSYDSSLEIAEKYANKYSF
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEE
IKIFSQKNMGLPASRDKGLSEAQGEYVIYWDSDDSVESTMLEVLYNRAKADNSDIVCSQF
EEEEECCCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
YVYFLAINVKRKSLLPFPNYPLTGKEAFKNLFFTVYATFGRKNFVVGTLWDKLIRRELIL
HHHHHEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
KNNIRQQNVVFEDIVFVMQIFLKASKVSFVNNYFYTNFQRMGSMSSSISVLHKAKLSLNT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IETLLKKEGILNEYQHLYKRFFLQFYYFISFKQIYIISWNISDKLVYRAYKEKLISVLDE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
IKGLSEFQDYYEYAKNFGFNEIQILPRIMLKIWNFSSRLYVNFSIFIYKLFIKN
HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]