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The map label for this gene is secY [H]

Identifier: 51598753

GI number: 51598753

Start: 507876

End: 509180

Strand: Direct

Name: secY [H]

Synonym: BG0510

Alternate gene names: 51598753

Gene position: 507876-509180 (Clockwise)

Preceding gene: 51598752

Following gene: 51598754

Centisome position: 56.17

GC content: 29.73

Gene sequence:

>1305_bases
ATGAAAGAATTGTTTTTAAGTTTATTTACTGTTAAGGATTTAAGAAATAAGTTCTTGGTTACTTTATTTATTCTTTTTCT
TTTTAGAGTTGGTTCATACTTGCCGATACCAGGAATAGATTCTGTAGCGCTGAAAAGTTATTTTAAGTCACAATCAGATT
TTTCAATTGCTAATTATTTTGATTTTTTTTCAGGTGGAGCTTTTAGTAATTTTTCTATATTTATGCTTAGTATAGGGCCC
TACATTTCAGCATCTATTATTGTTCAGCTTCTTGTTTATTCTTTTCCTTCTTTAAAAAAAATGCAAGAAGGTGATGGAGG
AAGACAAAAGACTAAAAAATATACAAAATATTTAACAATAGTTGCAGCTATGGTTCAAGGATATGCAACAAGTCTTTATG
CTAAGGGTATTCCGGGTGCCGTTACTATTCCTTTTTATAGGTATATTTTTATTGCTATTTTAACAGTTACTACAGGAACA
TTTATCCTTTTGTGGTTTGGAGAGCAGATTAACCAAAGAGGTGTGGGCAATGGAACATCTTTGATAATTTTTTCTGGCAT
AGTAGTTAGACTTCAGGCAGCTTTGTTTAACTTATTCCAAAGCATGCAAGATCCTTCTCAAAATGTTAATCCTGTTTTTG
TGATACTTGTTATAAGCATATTTATTTTAGTTGTTATCTTAATTATATATGAATATAAAGCTCAAATGCGAATTGCTATT
CATTATGCTAGAGCAAATTCTAATAGTACGGTTAGTTCATATTTGCCAATCAAGTTGAATCCATCGGGCGTTTTGCCTGT
TATTTTTGCTTCTGTTTTAATTACTTTGCCCTTGCAAATTTTAAGCGGTTTTGCGGAAACTTCTTCTATAGCTAGACAAG
TTTTATCTTATTTAAGGCCCAACGGATTTTATTATACTTTCTTGAATGTAGTCTTAATAATCGGATTTACGTATTTTTAT
TCTAAGATTCAGTTAAATCCTAAAGACATAAGTAATAATATTCGTAAGAACGGAGGCACTATTCCTGGAATAAAGTCTGA
TGAGATGGAAAAATATTTAGATGAAATTATGAATAAAACTTTATTTTCAGGATCTATTTTTTTGTCAATTATTGCAATTA
TTCCATTTTTAGTGCAAAATATTTTTAGATTTCCGCATGATGTTTCTAGGATAATGGGGGGGTCTTCTTTACTTATCATG
ATAGGAGTTGCGCTTGATACATTGATTCATATTGATGCTTATTTGAAAACTCAAGGATTTTCTTATAGAAATAAAAAAAA
TTATGCATTTTTGCAAAAAATTTAG

Upstream 100 bases:

>100_bases
AAAAAAAGTTTCCTTGGAAGTTTCTAAAATTTCTAAATCGGCTGAAAGCCTTGTAATAAGAATTGGTGGTACTATTAAAT
TAGTTTAAAGTGGAATAAAA

Downstream 100 bases:

>100_bases
GAGTGTTTAACTATGAAAGTTAGGGCAAGTGTAAAGCCAATTTGTGAAAAATGTAAAGTTATAAAAAGAAAAGGTGTATT
AAGGATTATTTGTGATAATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKELFLSLFTVKDLRNKFLVTLFILFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGP
YISASIIVQLLVYSFPSLKKMQEGDGGRQKTKKYTKYLTIVAAMVQGYATSLYAKGIPGAVTIPFYRYIFIAILTVTTGT
FILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPVFVILVISIFILVVILIIYEYKAQMRIAI
HYARANSNSTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQVLSYLRPNGFYYTFLNVVLIIGFTYFY
SKIQLNPKDISNNIRKNGGTIPGIKSDEMEKYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
IGVALDTLIHIDAYLKTQGFSYRNKKNYAFLQKI

Sequences:

>Translated_434_residues
MKELFLSLFTVKDLRNKFLVTLFILFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGP
YISASIIVQLLVYSFPSLKKMQEGDGGRQKTKKYTKYLTIVAAMVQGYATSLYAKGIPGAVTIPFYRYIFIAILTVTTGT
FILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPVFVILVISIFILVVILIIYEYKAQMRIAI
HYARANSNSTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQVLSYLRPNGFYYTFLNVVLIIGFTYFY
SKIQLNPKDISNNIRKNGGTIPGIKSDEMEKYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
IGVALDTLIHIDAYLKTQGFSYRNKKNYAFLQKI
>Mature_434_residues
MKELFLSLFTVKDLRNKFLVTLFILFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGP
YISASIIVQLLVYSFPSLKKMQEGDGGRQKTKKYTKYLTIVAAMVQGYATSLYAKGIPGAVTIPFYRYIFIAILTVTTGT
FILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPVFVILVISIFILVVILIIYEYKAQMRIAI
HYARANSNSTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSGFAETSSIARQVLSYLRPNGFYYTFLNVVLIIGFTYFY
SKIQLNPKDISNNIRKNGGTIPGIKSDEMEKYLDEIMNKTLFSGSIFLSIIAIIPFLVQNIFRFPHDVSRIMGGSSLLIM
IGVALDTLIHIDAYLKTQGFSYRNKKNYAFLQKI

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=35.5294117647059, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48720; Mature: 48720

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHHHCC
>Mature Secondary Structure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CCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]