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The map label for this gene is ymdB [H]

Identifier: 51598726

GI number: 51598726

Start: 492085

End: 492915

Strand: Direct

Name: ymdB [H]

Synonym: BG0483

Alternate gene names: 51598726

Gene position: 492085-492915 (Clockwise)

Preceding gene: 51598725

Following gene: 51598727

Centisome position: 54.42

GC content: 29.6

Gene sequence:

>831_bases
ATGTCTTTAAGGGTTTTGATTGCCGGCGAGGTTGTCGGTAAAGCTGGAATTATTGCTATAAAATCTTTTTTATCATCCTT
TAGAGTTAGGAGAGGGATTGATTTTGTAATATCTGGCAATAATTTTACTACGGGTTTAAGGGGTCTTGGCAAGAAGCATG
CCTTTTTATTGAAAAAGTATGGAGTTGATGTTTTAACCTTAGGTGAAAATGCTTTTGCAAGGGCAGATTTGTCTAATGAT
CTTGACAAGTATAATTTTATTTTAAAACCTTTAAATTGTCCTGCAAAATTAAAAGGATATTCTTATTTTATTTATAATAT
TAATGGTAAAAAATTGGCTGTGGTGAGAATTGTAGGCCAAACAGGAATAACTAAGTATAAATTTAATCATCCTTTTTATA
GTTTTGACTTTTTTTATAAAAGAATTGAAATGCAAACAAACAATATTATTGTTCTTTTTGATTCAAATACTACGGCCGAA
GTTAATGCTTTATTTTTTTATCTAAAATCAAGAGTTAGTGCTTGTCTTGGAACTGGCAAAAGGATTTTAACAGCTGATTT
GAGAATTTTAGATAATACTGCTGTTATAACTGATTTAGGCAGAGTTGGGAGTTTGGATAGCGTTATTGGATATGTTCCTG
ATTTAGAGGTGGATAAATTTTTGAAAGGATTTTTAAATCAAAGATTTAATGAATCTTGGGAAGGTATTGGTTTTAACGGT
GTTTTAATTGATATCGATGAGAATGGACATTCTTTTTCTGTAGAAACTGTCAGAGAATATATAGATTATAAATCAAGTTT
AAAAGATATGGATGATATGGATATTATTTGA

Upstream 100 bases:

>100_bases
TGATTGTTTTTGCTATTTTGGTGGGATATTTTGTGTCAATTTTTATTGTAAGAAGTTTGTTTATTGAGTTATTTGAACCA
GATAAATAAAGAGAGGCTTT

Downstream 100 bases:

>100_bases
TATTTATGTCTTTTAAGGGATTTTTTAAATTTAATTGATCTTATTAATTGATCTTATTAATTGATCTTATTAATGTGATT
TAATTTTATTAATTTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSLRVLIAGEVVGKAGIIAIKSFLSSFRVRRGIDFVISGNNFTTGLRGLGKKHAFLLKKYGVDVLTLGENAFARADLSND
LDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVVRIVGQTGITKYKFNHPFYSFDFFYKRIEMQTNNIIVLFDSNTTAE
VNALFFYLKSRVSACLGTGKRILTADLRILDNTAVITDLGRVGSLDSVIGYVPDLEVDKFLKGFLNQRFNESWEGIGFNG
VLIDIDENGHSFSVETVREYIDYKSSLKDMDDMDII

Sequences:

>Translated_276_residues
MSLRVLIAGEVVGKAGIIAIKSFLSSFRVRRGIDFVISGNNFTTGLRGLGKKHAFLLKKYGVDVLTLGENAFARADLSND
LDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVVRIVGQTGITKYKFNHPFYSFDFFYKRIEMQTNNIIVLFDSNTTAE
VNALFFYLKSRVSACLGTGKRILTADLRILDNTAVITDLGRVGSLDSVIGYVPDLEVDKFLKGFLNQRFNESWEGIGFNG
VLIDIDENGHSFSVETVREYIDYKSSLKDMDDMDII
>Mature_275_residues
SLRVLIAGEVVGKAGIIAIKSFLSSFRVRRGIDFVISGNNFTTGLRGLGKKHAFLLKKYGVDVLTLGENAFARADLSNDL
DKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVVRIVGQTGITKYKFNHPFYSFDFFYKRIEMQTNNIIVLFDSNTTAEV
NALFFYLKSRVSACLGTGKRILTADLRILDNTAVITDLGRVGSLDSVIGYVPDLEVDKFLKGFLNQRFNESWEGIGFNGV
LIDIDENGHSFSVETVREYIDYKSSLKDMDDMDII

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31019; Mature: 30888

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRVLIAGEVVGKAGIIAIKSFLSSFRVRRGIDFVISGNNFTTGLRGLGKKHAFLLKKY
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHHHHHHH
GVDVLTLGENAFARADLSNDLDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVVRIVGQ
CCEEEEECCCCEEECCCCCCHHHHEEEEECCCCCCEECCEEEEEEEECCCEEEEEEEECC
TGITKYKFNHPFYSFDFFYKRIEMQTNNIIVLFDSNTTAEVNALFFYLKSRVSACLGTGK
CCCEEEEECCCEEHHHHHHEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
RILTADLRILDNTAVITDLGRVGSLDSVIGYVPDLEVDKFLKGFLNQRFNESWEGIGFNG
EEEEEEEEEECCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
VLIDIDENGHSFSVETVREYIDYKSSLKDMDDMDII
EEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLRVLIAGEVVGKAGIIAIKSFLSSFRVRRGIDFVISGNNFTTGLRGLGKKHAFLLKKY
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHHHHHHH
GVDVLTLGENAFARADLSNDLDKYNFILKPLNCPAKLKGYSYFIYNINGKKLAVVRIVGQ
CCEEEEECCCCEEECCCCCCHHHHEEEEECCCCCCEECCEEEEEEEECCCEEEEEEEECC
TGITKYKFNHPFYSFDFFYKRIEMQTNNIIVLFDSNTTAEVNALFFYLKSRVSACLGTGK
CCCEEEEECCCEEHHHHHHEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
RILTADLRILDNTAVITDLGRVGSLDSVIGYVPDLEVDKFLKGFLNQRFNESWEGIGFNG
EEEEEEEEEECCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
VLIDIDENGHSFSVETVREYIDYKSSLKDMDDMDII
EEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]