Click here to switch to the map view.

The map label for this gene is yiaF

Identifier: 51598202

GI number: 51598202

Start: 4676041

End: 4676766

Strand: Direct

Name: yiaF

Synonym: YPTB3917

Alternate gene names: 51598202

Gene position: 4676041-4676766 (Clockwise)

Preceding gene: 51598201

Following gene: 51598203

Centisome position: 98.55

GC content: 49.45

Gene sequence:

>726_bases
TTGCACATGATTTTTGCATTGAACACCGTCCGGAACCCACGCTGGCTGGCACCTTTATTGGCGTTCTTGGTCATGTTCTT
GGTGACCGCCTGCGGAGATAAAGAGCCAGAACAACGTAAGGCTTTTATTGATTATCTGCAAAACACCGTGATGCGCAGTG
GGATGAAACTGCCAACACTGAGTGAAGACCAAAAGCAGAAGTTTGGCCCTTATGTCAGCGACTACGCGATTTTAGTCACT
TTTTCACAGCAATTGAGTAAGTCAGTTGATGCCAGTCTGGTCCCGGCTATTGAGCAAATCAATCAAATCCGCGTGGCACA
GGATTACCTCAGTAAGCGTGATGCGTTACAGCAGTCTGCGGGTGCGCTGAACCTGTTAGTGCAACAAATCCGCACTGCCA
AAGCTCAAGCTGACAGCGCCCAAGCCGCATTGAAGCTGCCAGATGACTTGAAAGTGGTGTTCAACAGAGCCTTTGATAAC
ATTGTGACTCAGCCTGCTAATGTGTTGATTCCAGCAGTGCCGGTGGTCTCTTCATTTGTGCAAGATCTGGTTCAGGTTGG
GGATTTCCTGCAACAGCAGGGTACGCAAGTGACCTTTAATAACGGTGGCATTCAATTCCAGACTCCGCAGCAAGCCGCTC
AGTACAACACGATGATGAGTAACTTGGTCGCCAAGTACCCGGAGATGATGGCCGCGCAAAAGCGCGTGATGAAGGTAATG
CAGTAA

Upstream 100 bases:

>100_bases
GATTTTATCTAATAGCGATTTTATCCAATAGATTGTGTACCGCACGGATTGGATGCTAAGAACGGGATTTTGTGAGAGTA
AATAGTTTATTAAGGAGTGA

Downstream 100 bases:

>100_bases
TAGATGTTGTTAAATAGAATTTGCGTATTGCGAAGGCAGACTGCTGACAAACCCCGATGACTCAATCTTGAACGGTGAGG
ATAGGCAGAAGAGTAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MHMIFALNTVRNPRWLAPLLAFLVMFLVTACGDKEPEQRKAFIDYLQNTVMRSGMKLPTLSEDQKQKFGPYVSDYAILVT
FSQQLSKSVDASLVPAIEQINQIRVAQDYLSKRDALQQSAGALNLLVQQIRTAKAQADSAQAALKLPDDLKVVFNRAFDN
IVTQPANVLIPAVPVVSSFVQDLVQVGDFLQQQGTQVTFNNGGIQFQTPQQAAQYNTMMSNLVAKYPEMMAAQKRVMKVM
Q

Sequences:

>Translated_241_residues
MHMIFALNTVRNPRWLAPLLAFLVMFLVTACGDKEPEQRKAFIDYLQNTVMRSGMKLPTLSEDQKQKFGPYVSDYAILVT
FSQQLSKSVDASLVPAIEQINQIRVAQDYLSKRDALQQSAGALNLLVQQIRTAKAQADSAQAALKLPDDLKVVFNRAFDN
IVTQPANVLIPAVPVVSSFVQDLVQVGDFLQQQGTQVTFNNGGIQFQTPQQAAQYNTMMSNLVAKYPEMMAAQKRVMKVM
Q
>Mature_241_residues
MHMIFALNTVRNPRWLAPLLAFLVMFLVTACGDKEPEQRKAFIDYLQNTVMRSGMKLPTLSEDQKQKFGPYVSDYAILVT
FSQQLSKSVDASLVPAIEQINQIRVAQDYLSKRDALQQSAGALNLLVQQIRTAKAQADSAQAALKLPDDLKVVFNRAFDN
IVTQPANVLIPAVPVVSSFVQDLVQVGDFLQQQGTQVTFNNGGIQFQTPQQAAQYNTMMSNLVAKYPEMMAAQKRVMKVM
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=213, Percent_Identity=53.0516431924883, Blast_Score=240, Evalue=8e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 26873; Mature: 26873

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]