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The map label for this gene is yhiR [H]

Identifier: 51598107

GI number: 51598107

Start: 4553274

End: 4554116

Strand: Direct

Name: yhiR [H]

Synonym: YPTB3817

Alternate gene names: 51598107

Gene position: 4553274-4554116 (Clockwise)

Preceding gene: 51598104

Following gene: 51598108

Centisome position: 95.97

GC content: 49.58

Gene sequence:

>843_bases
ATGTTAAGTTATCGCCATAGTTTTCATGCTGGCAATCATGCCGACGTCCTTAAACATACCGTTCAGAGCCTGATTATTGA
GGCAATGAAAGAGAAAGAAAAACCTTTCCTTTATCTGGATACTCACGCGGGTGCAGGGCGCTACCAACTGAGTGGCGAGC
ATGCCGAGCGTACCGGGGAATACCTCGACGGTATCGGCAAACTGTGGCAACGCGATGACTTACCCGCAGATTTAGCCCCG
TACATGAGCGCAATCAACTATTTTAACCGTGGCGAAAAACTGCGCTACTACCCTGGCTCGCCGTTAATCGCACGTCATTT
ATTACGTGAAGACGACAAAATCCATCTGACCGAACTGCATTCCAGCGATTACCCACTGCTGCGCAATGAGTTTGCCAAAG
ACGAACGTGCAAAAGTACAGCGTGCCGATGGTTATCAGCAGCTTAAATCACAATTACCGCCGCTATCGCGCCGTGGCTTT
GTGCTGATCGACCCACCGTATGAAATGAAAACTGATTATCAGGATGTGGTGAAAGGTATTCAGGAGGGCTATAAACGATT
CGCAACGGGTACCTATGCGCTATGGTATCCGGTCGTTCTGCGCCAGCAAATTAAACGTCTGTTACGGGATCTGGAAGCCA
CGGGTATCCGCCGTATCCTGCAAATTGAACTGGCGGTACGCCCAGATAGCGACCAGCACGGTATGACCGCATCCGGCATG
ATTGTGATTAATCCGCCGTGGAAATTAGAACAGCAAATGAATTCATTATTGCCGTGGCTGCACAAAGCATTGGTCCCATC
AGGCCACGGTCATACGCTGGTAAAATGGATAGTCCCTGAATAG

Upstream 100 bases:

>100_bases
CCCTCCGCAGGAAGAAACAGCAAGCAGCATCGCCGCAATGTACAAACATATTCCATTCAAATCCATGATTTAACTGTGAA
TATCACTTGGTCAAAATAAA

Downstream 100 bases:

>100_bases
CGAATAGTCCCTGAATAAGGGGCTATGCCTATCAGAGTCATTGATGTACAAAAGGCTCTCAGACGCTACACTGTTAGGCA
ATTTTAAACGACTCTACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIEAMKEKEKPFLYLDTHAGAGRYQLSGEHAERTGEYLDGIGKLWQRDDLPADLAP
YMSAINYFNRGEKLRYYPGSPLIARHLLREDDKIHLTELHSSDYPLLRNEFAKDERAKVQRADGYQQLKSQLPPLSRRGF
VLIDPPYEMKTDYQDVVKGIQEGYKRFATGTYALWYPVVLRQQIKRLLRDLEATGIRRILQIELAVRPDSDQHGMTASGM
IVINPPWKLEQQMNSLLPWLHKALVPSGHGHTLVKWIVPE

Sequences:

>Translated_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIEAMKEKEKPFLYLDTHAGAGRYQLSGEHAERTGEYLDGIGKLWQRDDLPADLAP
YMSAINYFNRGEKLRYYPGSPLIARHLLREDDKIHLTELHSSDYPLLRNEFAKDERAKVQRADGYQQLKSQLPPLSRRGF
VLIDPPYEMKTDYQDVVKGIQEGYKRFATGTYALWYPVVLRQQIKRLLRDLEATGIRRILQIELAVRPDSDQHGMTASGM
IVINPPWKLEQQMNSLLPWLHKALVPSGHGHTLVKWIVPE
>Mature_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIEAMKEKEKPFLYLDTHAGAGRYQLSGEHAERTGEYLDGIGKLWQRDDLPADLAP
YMSAINYFNRGEKLRYYPGSPLIARHLLREDDKIHLTELHSSDYPLLRNEFAKDERAKVQRADGYQQLKSQLPPLSRRGF
VLIDPPYEMKTDYQDVVKGIQEGYKRFATGTYALWYPVVLRQQIKRLLRDLEATGIRRILQIELAVRPDSDQHGMTASGM
IVINPPWKLEQQMNSLLPWLHKALVPSGHGHTLVKWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=78.5714285714286, Blast_Score=472, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32304; Mature: 32304

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIEAMKEKEKPFLYLDTHAGAGRYQLSGEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHHHHHHHH
YLDGIGKLWQRDDLPADLAPYMSAINYFNRGEKLRYYPGSPLIARHLLREDDKIHLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCEEEEEEC
SSDYPLLRNEFAKDERAKVQRADGYQQLKSQLPPLSRRGFVLIDPPYEMKTDYQDVVKGI
CCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCHHCCCHHHHHHHH
QEGYKRFATGTYALWYPVVLRQQIKRLLRDLEATGIRRILQIELAVRPDSDQHGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCE
IVINPPWKLEQQMNSLLPWLHKALVPSGHGHTLVKWIVPE
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIEAMKEKEKPFLYLDTHAGAGRYQLSGEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHHHHHHHH
YLDGIGKLWQRDDLPADLAPYMSAINYFNRGEKLRYYPGSPLIARHLLREDDKIHLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCEEEEEEC
SSDYPLLRNEFAKDERAKVQRADGYQQLKSQLPPLSRRGFVLIDPPYEMKTDYQDVVKGI
CCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCHHCCCHHHHHHHH
QEGYKRFATGTYALWYPVVLRQQIKRLLRDLEATGIRRILQIELAVRPDSDQHGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCE
IVINPPWKLEQQMNSLLPWLHKALVPSGHGHTLVKWIVPE
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]