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The map label for this gene is rstR1 [H]

Identifier: 51597909

GI number: 51597909

Start: 4305385

End: 4305792

Strand: Direct

Name: rstR1 [H]

Synonym: YPTB3618

Alternate gene names: 51597909

Gene position: 4305385-4305792 (Clockwise)

Preceding gene: 51597903

Following gene: 51597910

Centisome position: 90.74

GC content: 44.85

Gene sequence:

>408_bases
ATGACTGACGTGATAGACGAGATTATGCAGACGGAAGAACAGCGCCGGGCATTTGGCCTACGGCTAAAAGAATTACGTAA
ACAACAACATAAAACACAAAAGGAAGTCGCGACCCGTATTGGCTTGCAACTTTCACAGTACAATAAATATGAATCAGGGA
TGCATATTCCACCGGCGGATAAATTAATTACGCTGGCTGAGTTACTGGTTACCAGCATTGATTATCTGCTACTTGGCTCG
TCTAACGAGACCTCATCGATTAGGAATACGCGCTTATTAGAGCGTTTTAAAGCCTTGTCGCAGTGCCAACCGGAAGAGCA
GGAAACCGTGATTAAGTTAATTGATGCGGTGATTGTGAAGCATCGGGTTGAATCGGCTTTACAGCCAGTTGACCCAGAGA
AGAAGTGA

Upstream 100 bases:

>100_bases
AAATACGTTAACATTTAATTTGCATCGTATTACGATATCTAATAGCATCGCTATACGATGTGTATTCGTTTTTAAAAGTG
GCCTTATACTGGAGCATCTT

Downstream 100 bases:

>100_bases
TAACCACAGTATTTTAACACAGGGTTGAGGTGTATCAGCACCTCAGCCCCGCTAACCACAAGCAACTAAGCAGGAGTTAC
TATGGCTAAGGCACATTCTA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESGMHIPPADKLITLAELLVTSIDYLLLGS
SNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPEKK

Sequences:

>Translated_135_residues
MTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESGMHIPPADKLITLAELLVTSIDYLLLGS
SNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPEKK
>Mature_134_residues
TDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESGMHIPPADKLITLAELLVTSIDYLLLGSS
NETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPEKK

Specific function: Transcriptional repressor of the integrated CTXPhi phage gene rstA2 [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15529; Mature: 15398

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESGMHIPPAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KLITLAELLVTSIDYLLLGSSNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HRVESALQPVDPEKK
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESGMHIPPAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
KLITLAELLVTSIDYLLLGSSNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HRVESALQPVDPEKK
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9220000; 10952301 [H]