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The map label for this gene is ygfY [C]

Identifier: 51597484

GI number: 51597484

Start: 3730696

End: 3730962

Strand: Reverse

Name: ygfY [C]

Synonym: YPTB3173

Alternate gene names: 51597484

Gene position: 3730962-3730696 (Counterclockwise)

Preceding gene: 51597486

Following gene: 51597483

Centisome position: 78.63

GC content: 45.32

Gene sequence:

>267_bases
ATGGAAATTGATAATAAAGCCCGTATTCACTGGGCATGCCGCCGTGGTATGCGTGAACTTGATATCTCCATCATGCCGTT
TTTTGAATATGAATATGATAGCTTGAGCGATAACGAGAAACAGGCATTTATCCGCTTGCTTGAGTGTGATGACCCAGATT
TATTCAACTGGCTGATGAACCACGGGGAGCCGCAGGATAGCGAGCTATATCAGATGGTCAAACTGATTCAATCACGAAAT
AAAGCCCGTGGCCCAGTGGCGATGTAA

Upstream 100 bases:

>100_bases
GTTAGTTATATTAACGAGTTATTCTAACAGCTAACTGAATCGGGCATTTAATCTCTGCTGGGTTCAGACAATATCCTTAC
ATTGAGGAGTCAATCAGGAC

Downstream 100 bases:

>100_bases
CCTGCGGGTATCCTGGCATACTCAACTCTTTTCTTTATTGGCACACGGCATATTGGTCATTTTAACCTTGGTCGCGCCCT
GGCCCTTGGGTTATACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEIDNKARIHWACRRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMNHGEPQDSELYQMVKLIQSRN
KARGPVAM

Sequences:

>Translated_88_residues
MEIDNKARIHWACRRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMNHGEPQDSELYQMVKLIQSRN
KARGPVAM
>Mature_88_residues
MEIDNKARIHWACRRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMNHGEPQDSELYQMVKLIQSRN
KARGPVAM

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family

Homologues:

Organism=Escherichia coli, GI1789264, Length=88, Percent_Identity=81.8181818181818, Blast_Score=158, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3173_YERPS (Q666S3)

Other databases:

- EMBL:   BX936398
- RefSeq:   YP_071675.1
- ProteinModelPortal:   Q666S3
- SMR:   Q666S3
- GeneID:   2954677
- GenomeReviews:   BX936398_GR
- KEGG:   yps:YPTB3173
- HOGENOM:   HBG730588
- OMA:   KLRIEWD
- ProtClustDB:   PRK10878
- BioCyc:   YPSE273123:YPTB3173-MONOMER
- InterPro:   IPR005631
- Gene3D:   G3DSA:1.10.150.250

Pfam domain/function: PF03937 DUF339; SSF109910 DUF339

EC number: NA

Molecular weight: Translated: 10512; Mature: 10512

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDNKARIHWACRRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMN
CCCCCCHHHHHHHHCCHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
HGEPQDSELYQMVKLIQSRNKARGPVAM
CCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEIDNKARIHWACRRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMN
CCCCCCHHHHHHHHCCHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH
HGEPQDSELYQMVKLIQSRNKARGPVAM
CCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA