Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is 51597451
Identifier: 51597451
GI number: 51597451
Start: 3698264
End: 3700069
Strand: Reverse
Name: 51597451
Synonym: YPTB3140
Alternate gene names: NA
Gene position: 3700069-3698264 (Counterclockwise)
Preceding gene: 51597473
Following gene: 51597450
Centisome position: 77.98
GC content: 49.89
Gene sequence:
>1806_bases ATGGCAAAATATTCTGATGAAATAAAAGAAGCGGCGCGAACACTTTATATTAAAAGTTGGACGCCAAAAGATATTGCGCA GGAATTAAACATTCCAGTGCGCACCATTTATCATTGGTCTGATATAGGCCAGTGGGCATCATTATTACCGGTTGAATCTT TTGAATCGGCCATTGCGCGCCGGCATGACCAGTTATCACGGCGCGATAACAAAACCGCGCTGGAGTTGGAAGAGATCCGC GACCTGGTCGCGCACCATGTCAAATTAATGGCGCAAGGTAATAAACACGCTGAAAAGATGGCAGAAATAAAAGCACGCAT GGCGATGCAGTCAGGTGGCGGCGAGGATGAAACCGGATTCGGCAGCGAGAGGAAACGTTCATACCGCAAAAATGATATTT CCAGTATCACAAAAGAAATGTTGGATAGTTGGGCCAGTGAACACCTGTTTGATTACCAAATGCATTGTCGCGCCAATAAA GAGCAGAACTTCCGGCACATTCTGAAATCGCGTCAAGTCGGCATGACTTACTATTTTGCTTTTGAAGCCTTTGAAGATGC GGTGTTAACCGGTGACCGCCAGGTGTTTTTCTCTGCGTCTCGCGCACAGTCTGAAATCTTCAAATTTTATATTGTCGAAA TAGCTCAACAGGCGTTTGGTATTACGCTGACCGGTAACCCAATCAAACTAAGTAACGGGGCGGTGCTGCGGTTCTTGTCG ACCAATGCCGGCACGGCTCAGGGTTTTAACGGCCATCTTTACGGCGACGAAATATTCTGGATACCCAAATTTGGGAAATT CCACGAAACCGCGTCAGCCATGGCAACGCATAACAAATACCGCACAACTTACTTTTCAACGCCCAGTGCCAAAACACACC CGGCGTATCCCATCTGGACGGGGGATACCTGGCGGGAAGATGACGCCAAACGGAAAAAGGCCATATTCCCGAAAGAAAGC GAACTGCGTAAAGGGGGGATTCTTTGCCCGGATGATCAATGGCGCTACATCATCACGATGGAAGACGCGATCAAGGGCGG GCTGGGTGCTTTGGTCGATATTGAGCGGTTGCGTAATAAATACAATGCGACCGCGTTCGCCATGCTGTACATGTGCCAAT TTGTTGACAGCAAAGACGCGGTATTCAAGTTTTCAGAACTGGAAAAATGCGCGGTAGATGCCGGCATGTGGCAAGACCAC GACCCCAAAGCCGCCAGGCCATTTGGTAATCGTGAAGTGTGGGGCGGCTTTGACCCGTCCCGTTCCGGCGATAACTCAAC TTTTGTGATTGTCGCGCCGCCGCTCTATGACGGTGAACGGTTCCGGGTGTTAGCCGTGTATTACTGGCAAGGACTGAATT TTAACTATCAAGCCGATCAAATCAAGCAACTGATGCGCCGCTATAACATGACTTATATCGGTATTGATATCACCGGCATC GGGCGCGGGGTATTTGACTTAGTTGAACGCTTCGCGCCCCGTGAAGCCACTCCTATTTTATATACGGTTGAGAGTAAAAA CCGCCTGGTGCTGAAAATGATAGATACCGTTTCCCGTGGCCGTATTGAGTGGAGCAAGGACGCGACGGATGAATGTAGTC AGGAGCGAGCCGAAATTGCCGCCAGCTTTATGGCCATCCGACGCACCACCACTGCCAGCGGCAATGCGCTTACCTTTGTG GCCGAACGGTCAGACGCGACCGGTCACGCCGACGTATTTTTCGCCATTTCTCACGCCGTGATTAATGAACCCCTCGACTA TGAATATGATCGCCCGTCTACCTGGGCCTTTGGAAAAGCAGCATGA
Upstream 100 bases:
>100_bases TGTGGTTATTCCCTTATAATAAATTCGGTTAAGTGTTGTTAACGTAACTTAACCGAATTTATTATAATTTATCGTTGTGT TATGTCGCCATAATCGACTT
Downstream 100 bases:
>100_bases CAACTAAAAAGAAACGCGGACGCCAGAACAGCAGCCAGCAAAAAAAAGCCAAGGCAACCGAGGATTTCACCCCTGGGCGG GGCAGTGTTATCTCTTTCGG
Product: orf16-like phage protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase Large Subunit; Fels-2 Prophage Protein; Prophage Large Terminase Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Phage Terminase Subunit GpP; Terminase Large Subunit; Mu-Like Prophage FluMu Protein Gp; DNA-Dependent ATPase Terminase Subunit; Prophage; Terminase ATPase Subunit Bacteriophage Origin; ATPase Subunit Of Terminase; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage Gene; Terminase Subunit; Phage-Related Terminase; Phage P2 Terminase ATPase Subunit GpP-Like Protein
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MAKYSDEIKEAARTLYIKSWTPKDIAQELNIPVRTIYHWSDIGQWASLLPVESFESAIARRHDQLSRRDNKTALELEEIR DLVAHHVKLMAQGNKHAEKMAEIKARMAMQSGGGEDETGFGSERKRSYRKNDISSITKEMLDSWASEHLFDYQMHCRANK EQNFRHILKSRQVGMTYYFAFEAFEDAVLTGDRQVFFSASRAQSEIFKFYIVEIAQQAFGITLTGNPIKLSNGAVLRFLS TNAGTAQGFNGHLYGDEIFWIPKFGKFHETASAMATHNKYRTTYFSTPSAKTHPAYPIWTGDTWREDDAKRKKAIFPKES ELRKGGILCPDDQWRYIITMEDAIKGGLGALVDIERLRNKYNATAFAMLYMCQFVDSKDAVFKFSELEKCAVDAGMWQDH DPKAARPFGNREVWGGFDPSRSGDNSTFVIVAPPLYDGERFRVLAVYYWQGLNFNYQADQIKQLMRRYNMTYIGIDITGI GRGVFDLVERFAPREATPILYTVESKNRLVLKMIDTVSRGRIEWSKDATDECSQERAEIAASFMAIRRTTTASGNALTFV AERSDATGHADVFFAISHAVINEPLDYEYDRPSTWAFGKAA
Sequences:
>Translated_601_residues MAKYSDEIKEAARTLYIKSWTPKDIAQELNIPVRTIYHWSDIGQWASLLPVESFESAIARRHDQLSRRDNKTALELEEIR DLVAHHVKLMAQGNKHAEKMAEIKARMAMQSGGGEDETGFGSERKRSYRKNDISSITKEMLDSWASEHLFDYQMHCRANK EQNFRHILKSRQVGMTYYFAFEAFEDAVLTGDRQVFFSASRAQSEIFKFYIVEIAQQAFGITLTGNPIKLSNGAVLRFLS TNAGTAQGFNGHLYGDEIFWIPKFGKFHETASAMATHNKYRTTYFSTPSAKTHPAYPIWTGDTWREDDAKRKKAIFPKES ELRKGGILCPDDQWRYIITMEDAIKGGLGALVDIERLRNKYNATAFAMLYMCQFVDSKDAVFKFSELEKCAVDAGMWQDH DPKAARPFGNREVWGGFDPSRSGDNSTFVIVAPPLYDGERFRVLAVYYWQGLNFNYQADQIKQLMRRYNMTYIGIDITGI GRGVFDLVERFAPREATPILYTVESKNRLVLKMIDTVSRGRIEWSKDATDECSQERAEIAASFMAIRRTTTASGNALTFV AERSDATGHADVFFAISHAVINEPLDYEYDRPSTWAFGKAA >Mature_600_residues AKYSDEIKEAARTLYIKSWTPKDIAQELNIPVRTIYHWSDIGQWASLLPVESFESAIARRHDQLSRRDNKTALELEEIRD LVAHHVKLMAQGNKHAEKMAEIKARMAMQSGGGEDETGFGSERKRSYRKNDISSITKEMLDSWASEHLFDYQMHCRANKE QNFRHILKSRQVGMTYYFAFEAFEDAVLTGDRQVFFSASRAQSEIFKFYIVEIAQQAFGITLTGNPIKLSNGAVLRFLST NAGTAQGFNGHLYGDEIFWIPKFGKFHETASAMATHNKYRTTYFSTPSAKTHPAYPIWTGDTWREDDAKRKKAIFPKESE LRKGGILCPDDQWRYIITMEDAIKGGLGALVDIERLRNKYNATAFAMLYMCQFVDSKDAVFKFSELEKCAVDAGMWQDHD PKAARPFGNREVWGGFDPSRSGDNSTFVIVAPPLYDGERFRVLAVYYWQGLNFNYQADQIKQLMRRYNMTYIGIDITGIG RGVFDLVERFAPREATPILYTVESKNRLVLKMIDTVSRGRIEWSKDATDECSQERAEIAASFMAIRRTTTASGNALTFVA ERSDATGHADVFFAISHAVINEPLDYEYDRPSTWAFGKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68528; Mature: 68397
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYSDEIKEAARTLYIKSWTPKDIAQELNIPVRTIYHWSDIGQWASLLPVESFESAIAR CCCCHHHHHHHHHEEEEECCCHHHHHHHCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHH RHDQLSRRDNKTALELEEIRDLVAHHVKLMAQGNKHAEKMAEIKARMAMQSGGGEDETGF HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC GSERKRSYRKNDISSITKEMLDSWASEHLFDYQMHCRANKEQNFRHILKSRQVGMTYYFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCEEEEEE FEAFEDAVLTGDRQVFFSASRAQSEIFKFYIVEIAQQAFGITLTGNPIKLSNGAVLRFLS EHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCEEEEEE TNAGTAQGFNGHLYGDEIFWIPKFGKFHETASAMATHNKYRTTYFSTPSAKTHPAYPIWT CCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEC GDTWREDDAKRKKAIFPKESELRKGGILCPDDQWRYIITMEDAIKGGLGALVDIERLRNK CCCCCCCHHHHHHCCCCCHHHHCCCCEECCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHH YNATAFAMLYMCQFVDSKDAVFKFSELEKCAVDAGMWQDHDPKAARPFGNREVWGGFDPS HCHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RSGDNSTFVIVAPPLYDGERFRVLAVYYWQGLNFNYQADQIKQLMRRYNMTYIGIDITGI CCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEEC GRGVFDLVERFAPREATPILYTVESKNRLVLKMIDTVSRGRIEWSKDATDECSQERAEIA CCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHCCCEEECCCCHHHHHHHHHHHH ASFMAIRRTTTASGNALTFVAERSDATGHADVFFAISHAVINEPLDYEYDRPSTWAFGKA HHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure AKYSDEIKEAARTLYIKSWTPKDIAQELNIPVRTIYHWSDIGQWASLLPVESFESAIAR CCCHHHHHHHHHEEEEECCCHHHHHHHCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHH RHDQLSRRDNKTALELEEIRDLVAHHVKLMAQGNKHAEKMAEIKARMAMQSGGGEDETGF HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC GSERKRSYRKNDISSITKEMLDSWASEHLFDYQMHCRANKEQNFRHILKSRQVGMTYYFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCEEEEEE FEAFEDAVLTGDRQVFFSASRAQSEIFKFYIVEIAQQAFGITLTGNPIKLSNGAVLRFLS EHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCEEEEEE TNAGTAQGFNGHLYGDEIFWIPKFGKFHETASAMATHNKYRTTYFSTPSAKTHPAYPIWT CCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEC GDTWREDDAKRKKAIFPKESELRKGGILCPDDQWRYIITMEDAIKGGLGALVDIERLRNK CCCCCCCHHHHHHCCCCCHHHHCCCCEECCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHH YNATAFAMLYMCQFVDSKDAVFKFSELEKCAVDAGMWQDHDPKAARPFGNREVWGGFDPS HCHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC RSGDNSTFVIVAPPLYDGERFRVLAVYYWQGLNFNYQADQIKQLMRRYNMTYIGIDITGI CCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEEC GRGVFDLVERFAPREATPILYTVESKNRLVLKMIDTVSRGRIEWSKDATDECSQERAEIA CCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHCCCEEECCCCHHHHHHHHHHHH ASFMAIRRTTTASGNALTFVAERSDATGHADVFFAISHAVINEPLDYEYDRPSTWAFGKA HHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA