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The map label for this gene is 51597450

Identifier: 51597450

GI number: 51597450

Start: 3697200

End: 3698267

Strand: Reverse

Name: 51597450

Synonym: YPTB3139

Alternate gene names: NA

Gene position: 3698267-3697200 (Counterclockwise)

Preceding gene: 51597451

Following gene: 51597449

Centisome position: 77.95

GC content: 49.81

Gene sequence:

>1068_bases
ATGACAACTAAAAAGAAACGCGGACGCCAGAACAGCAGCCAGCAAAAAAAAGCCAAGGCAACCGAGGATTTCACCCCTGG
GCGGGGCAGTGTTATCTCTTTCGGGGAGCCGGAACCGATATTAACCACAGGCACGGACTACAGTGAAATATGGTACGACA
ATGATTTTGACCACTGGCGATTGCCGATTGAACGCCTCGCCCTGGCGCAGCTGCCGAACCTTAACGGCCAACATGGTGGC
GTTCTCTATGCCAGGCGTAACATGTTGGTTAGCGACTACCTCGGCGGTGGGCTAACAACTGATAATATCGAGGGCGCGGC
GTTTGATTATTACCTTTTTGGTGATGTGGCTATCTTGAAAGTGCGGAATTTTTGGGGAGAGGTTATTGACCTGGTGCCGC
TGCCCTCACTCTATACGCGTCGGCGCAGAACGGGTGAGTTTGTCGTTTTACAAAAGGATGAGCCGTTATCTTATCCCCCG
GAAGATATTATATTTTTGGCGCAGTACGATCCCCAGCAACAAATTTACGGCTTACCAGATTATATTGGCGGTATTCACTC
GGTACTGCTTAATTCAGAGGCCACGATATTTCGCCGCCGCTATTACCATAATGGCGCACATATGGGTTTTATATTGTACG
CCAATGACCCCAGCATCAGCACGGAAGTAGAGCGGGAAATAAAAGAAAAAATAGAACAAAGCAAGGGCGTGGGTAACTTC
CGCAATATGTTTATCAGTATCCCCAAGGGTGATCCCGACGGCATTAAACTAATATCAATTGGTGAAGTGAGCGCCAAGGA
TGAGTTTTCCAACGTTAAAAGCATCACCGCCCAGGATATTCTCACCGCACACCGTTTCCCGTCAGGCCTGGCGGGGATTA
TCCCCCCCAATGGCACCGTGATGGGCGACCCGGAGAAGGCCCGCGCCACATACCGGAAAGATGAAGTTATTCCGGTACAA
AATAAGTTTATGCGTGCCGTGAATACCGATCCCGAGACACCCGCCCATTTACACCTGCGATTTAAAGCAGATAAAGACAC
GGATAACACCGAAAGGGGCGAAAATTGA

Upstream 100 bases:

>100_bases
GTCACGCCGACGTATTTTTCGCCATTTCTCACGCCGTGATTAATGAACCCCTCGACTATGAATATGATCGCCCGTCTACC
TGGGCCTTTGGAAAAGCAGC

Downstream 100 bases:

>100_bases
GCAAAAATAAGCTAAAATCACGGAAGTTAACAGAAATAGCTTTCGGAGTGGTTAATATGCGAATGTTCAAGATTAAATGC
ACAGAATGCCGCGCACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTTKKKRGRQNSSQQKKAKATEDFTPGRGSVISFGEPEPILTTGTDYSEIWYDNDFDHWRLPIERLALAQLPNLNGQHGG
VLYARRNMLVSDYLGGGLTTDNIEGAAFDYYLFGDVAILKVRNFWGEVIDLVPLPSLYTRRRRTGEFVVLQKDEPLSYPP
EDIIFLAQYDPQQQIYGLPDYIGGIHSVLLNSEATIFRRRYYHNGAHMGFILYANDPSISTEVEREIKEKIEQSKGVGNF
RNMFISIPKGDPDGIKLISIGEVSAKDEFSNVKSITAQDILTAHRFPSGLAGIIPPNGTVMGDPEKARATYRKDEVIPVQ
NKFMRAVNTDPETPAHLHLRFKADKDTDNTERGEN

Sequences:

>Translated_355_residues
MTTKKKRGRQNSSQQKKAKATEDFTPGRGSVISFGEPEPILTTGTDYSEIWYDNDFDHWRLPIERLALAQLPNLNGQHGG
VLYARRNMLVSDYLGGGLTTDNIEGAAFDYYLFGDVAILKVRNFWGEVIDLVPLPSLYTRRRRTGEFVVLQKDEPLSYPP
EDIIFLAQYDPQQQIYGLPDYIGGIHSVLLNSEATIFRRRYYHNGAHMGFILYANDPSISTEVEREIKEKIEQSKGVGNF
RNMFISIPKGDPDGIKLISIGEVSAKDEFSNVKSITAQDILTAHRFPSGLAGIIPPNGTVMGDPEKARATYRKDEVIPVQ
NKFMRAVNTDPETPAHLHLRFKADKDTDNTERGEN
>Mature_354_residues
TTKKKRGRQNSSQQKKAKATEDFTPGRGSVISFGEPEPILTTGTDYSEIWYDNDFDHWRLPIERLALAQLPNLNGQHGGV
LYARRNMLVSDYLGGGLTTDNIEGAAFDYYLFGDVAILKVRNFWGEVIDLVPLPSLYTRRRRTGEFVVLQKDEPLSYPPE
DIIFLAQYDPQQQIYGLPDYIGGIHSVLLNSEATIFRRRYYHNGAHMGFILYANDPSISTEVEREIKEKIEQSKGVGNFR
NMFISIPKGDPDGIKLISIGEVSAKDEFSNVKSITAQDILTAHRFPSGLAGIIPPNGTVMGDPEKARATYRKDEVIPVQN
KFMRAVNTDPETPAHLHLRFKADKDTDNTERGEN

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 40000; Mature: 39868

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKKKRGRQNSSQQKKAKATEDFTPGRGSVISFGEPEPILTTGTDYSEIWYDNDFDHWR
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCCCHHHHCCCCCCCHHH
LPIERLALAQLPNLNGQHGGVLYARRNMLVSDYLGGGLTTDNIEGAAFDYYLFGDVAILK
CCHHHHHHHHCCCCCCCCCCEEEEECCEEHHHHCCCCCCCCCCCCCEEEEEEECCEEEEH
VRNFWGEVIDLVPLPSLYTRRRRTGEFVVLQKDEPLSYPPEDIIFLAQYDPQQQIYGLPD
HHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHCCCHH
YIGGIHSVLLNSEATIFRRRYYHNGAHMGFILYANDPSISTEVEREIKEKIEQSKGVGNF
HHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
RNMFISIPKGDPDGIKLISIGEVSAKDEFSNVKSITAQDILTAHRFPSGLAGIIPPNGTV
EEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCE
MGDPEKARATYRKDEVIPVQNKFMRAVNTDPETPAHLHLRFKADKDTDNTERGEN
ECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TTKKKRGRQNSSQQKKAKATEDFTPGRGSVISFGEPEPILTTGTDYSEIWYDNDFDHWR
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCEEECCCCHHHHCCCCCCCHHH
LPIERLALAQLPNLNGQHGGVLYARRNMLVSDYLGGGLTTDNIEGAAFDYYLFGDVAILK
CCHHHHHHHHCCCCCCCCCCEEEEECCEEHHHHCCCCCCCCCCCCCEEEEEEECCEEEEH
VRNFWGEVIDLVPLPSLYTRRRRTGEFVVLQKDEPLSYPPEDIIFLAQYDPQQQIYGLPD
HHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHCCCHH
YIGGIHSVLLNSEATIFRRRYYHNGAHMGFILYANDPSISTEVEREIKEKIEQSKGVGNF
HHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
RNMFISIPKGDPDGIKLISIGEVSAKDEFSNVKSITAQDILTAHRFPSGLAGIIPPNGTV
EEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCE
MGDPEKARATYRKDEVIPVQNKFMRAVNTDPETPAHLHLRFKADKDTDNTERGEN
ECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]