Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is yadR
Identifier: 51595094
GI number: 51595094
Start: 895514
End: 895858
Strand: Direct
Name: yadR
Synonym: YPTB0744
Alternate gene names: 51595094
Gene position: 895514-895858 (Clockwise)
Preceding gene: 161760585
Following gene: 51595098
Centisome position: 18.87
GC content: 44.06
Gene sequence:
>345_bases ATGAGCAACGAAACAGTACTGCCCCTACAGTTTACCGAGGCGGCGGCAAAGAAAGTTAAACTACTGATTTCTGATGAGGA AAACCCGAATCTGAAACTGCGTGTTTACATTACCGGTGGTGGATGTAGCGGGTTCCAATATGGTTTTACTTTTGATGATC AGGTTAATGATGGTGATATGACCATTGAAAAACAAGGTGTTGAGCTGGTTGTTGACCCAATGAGCCTGCAATATTTAGTG GGCGGTGCCGTGGATTATACTGAAGGGCTGGAAGGTTCTCGTTTTATCGTGACTAACCCGAATGCAAAGAGTACTTGTGG GTGTGGTTCTTCTTTCAGTATCTAA
Upstream 100 bases:
>100_bases CAGGTATTAGATAATCGAGCCATAGATCAGGCTGCCAGTGTAGTAACCTGCAACGCGAAGTAGTAACCTGCAACTCGAAC ACCGGTTGGGAGTGATGAGG
Downstream 100 bases:
>100_bases TTTACCCTGCGTCCTTGGCGCTACAGCGGTGTTAGCTGCACTTACTTACCTGAATCACTGACCTGTCGTTGGCTTTATAT AAATAAGCTCATCGGGATTC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVELVVDPMSLQYLV GGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
Sequences:
>Translated_114_residues MSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVELVVDPMSLQYLV GGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI >Mature_113_residues SNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDMTIEKQGVELVVDPMSLQYLVG GAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family
Homologues:
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=46.9879518072289, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI52426768, Length=110, Percent_Identity=32.7272727272727, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1786351, Length=114, Percent_Identity=88.5964912280702, Blast_Score=211, Evalue=7e-57, Organism=Escherichia coli, GI1788877, Length=110, Percent_Identity=38.1818181818182, Blast_Score=72, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=40.7407407407407, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25146411, Length=112, Percent_Identity=30.3571428571429, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=30.8411214953271, Blast_Score=71, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=33.0188679245283, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649697, Length=109, Percent_Identity=41.2844036697248, Blast_Score=82, Evalue=5e-17, Organism=Drosophila melanogaster, GI24642263, Length=110, Percent_Identity=33.6363636363636, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ERPA_YERP3 (A7FM07)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001402285.1 - ProteinModelPortal: A7FM07 - SMR: A7FM07 - STRING: A7FM07 - GeneID: 5387701 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_3328 - eggNOG: COG0316 - HOGENOM: HBG730174 - OMA: TFDDQIN - ProtClustDB: PRK13623 - BioCyc: YPSE349747:YPSIP31758_3328-MONOMER - HAMAP: MF_01380 - InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 - Gene3D: G3DSA:2.60.300.12 - PANTHER: PTHR10072 - TIGRFAMs: TIGR00049
Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like
EC number: NA
Molecular weight: Translated: 12269; Mature: 12138
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDM CCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEECCEEECCCCCCCCE TIEKQGVELVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI EEECCCCEEEECCCEEEEEECCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SNETVLPLQFTEAAAKKVKLLISDEENPNLKLRVYITGGGCSGFQYGFTFDDQVNDGDM CCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEECCEEECCCCCCCCE TIEKQGVELVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI EEECCCCEEEECCCEEEEEECCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA