| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841990
Identifier: 50841990
GI number: 50841990
Start: 555291
End: 555911
Strand: Reverse
Name: 50841990
Synonym: PPA0506
Alternate gene names: NA
Gene position: 555911-555291 (Counterclockwise)
Preceding gene: 50841991
Following gene: 50841986
Centisome position: 21.71
GC content: 59.74
Gene sequence:
>621_bases GTGACGATTACCGACTTAGCCAGAGAATCCAAGTTACACGTCAACACGATTCGGGAGCCCCTCAACGTACTGGTGTCCTT GGGGTTGGTGGAACGCGAGAAACTCCCAGCAGCAGGCCGGGGCCGTCCATACTGGGGATACACGAGCCGGACCTTGTCCG GACCAAATTCACCGGCCGATCTGTTACGGCACCTGAGCCGGTCGACAATCCGGTGGATTCGCGACACCAGCGACGATCCC GTCGCCGCCGCGAGAAGCCTGGGAGAGCACCTGGGCGACGACGCTTTAGCGATGGCCAACGTCCCGGATCACACGGAGCA CTCCCCCAGTGACAAATTCAGCCTGGCCGATCATATGACGAAAATCCGCGTGTTCCTCACGGCTTTCGGTTTCTCCGCCG AGCCCCATCCGACGAATCCAACCGCTTTGATACTTCGAGCTTGTCCGTTCGTCGATCCCAATGACACCGATCCAGTTGCC ATGGCAATCCAGCAAGGCATGCTGTACCGGGTGATCGAGCGCACCGGGGGTAACTCCGTGCACGTCACGCTCCATCACGA GGAAGACTCCGCGCCCTGTGAGTTAGTCCTGACCCCGAACTTCACTAACGCAGCGAGCTGA
Upstream 100 bases:
>100_bases ATGAGCGGGCAAGGAATAGGCGAAATTCTCACCACCATTGCATCGCTCACCCCTGCCCAGCAGTCAGTCCTCAAAAAAAG TATCGCTCCACGCGGGACCA
Downstream 100 bases:
>100_bases GCCGTAAAAGCCTTTTTCGGGTTCTCAAGTAGCTGGGACACAACGCCATCCTCGATGATCCGGCCGTGCTCCAGAACAAC CAATCGTCCGGCCACCGTCA
Product: putative regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTITDLARESKLHVNTIREPLNVLVSLGLVEREKLPAAGRGRPYWGYTSRTLSGPNSPADLLRHLSRSTIRWIRDTSDDP VAAARSLGEHLGDDALAMANVPDHTEHSPSDKFSLADHMTKIRVFLTAFGFSAEPHPTNPTALILRACPFVDPNDTDPVA MAIQQGMLYRVIERTGGNSVHVTLHHEEDSAPCELVLTPNFTNAAS
Sequences:
>Translated_206_residues MTITDLARESKLHVNTIREPLNVLVSLGLVEREKLPAAGRGRPYWGYTSRTLSGPNSPADLLRHLSRSTIRWIRDTSDDP VAAARSLGEHLGDDALAMANVPDHTEHSPSDKFSLADHMTKIRVFLTAFGFSAEPHPTNPTALILRACPFVDPNDTDPVA MAIQQGMLYRVIERTGGNSVHVTLHHEEDSAPCELVLTPNFTNAAS >Mature_205_residues TITDLARESKLHVNTIREPLNVLVSLGLVEREKLPAAGRGRPYWGYTSRTLSGPNSPADLLRHLSRSTIRWIRDTSDDPV AAARSLGEHLGDDALAMANVPDHTEHSPSDKFSLADHMTKIRVFLTAFGFSAEPHPTNPTALILRACPFVDPNDTDPVAM AIQQGMLYRVIERTGGNSVHVTLHHEEDSAPCELVLTPNFTNAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22566; Mature: 22434
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITDLARESKLHVNTIREPLNVLVSLGLVEREKLPAAGRGRPYWGYTSRTLSGPNSPAD CCCHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH LLRHLSRSTIRWIRDTSDDPVAAARSLGEHLGDDALAMANVPDHTEHSPSDKFSLADHMT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHH KIRVFLTAFGFSAEPHPTNPTALILRACPFVDPNDTDPVAMAIQQGMLYRVIERTGGNSV HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE HVTLHHEEDSAPCELVLTPNFTNAAS EEEEEECCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TITDLARESKLHVNTIREPLNVLVSLGLVEREKLPAAGRGRPYWGYTSRTLSGPNSPAD CCHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH LLRHLSRSTIRWIRDTSDDPVAAARSLGEHLGDDALAMANVPDHTEHSPSDKFSLADHMT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHH KIRVFLTAFGFSAEPHPTNPTALILRACPFVDPNDTDPVAMAIQQGMLYRVIERTGGNSV HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE HVTLHHEEDSAPCELVLTPNFTNAAS EEEEEECCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA