| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841940
Identifier: 50841940
GI number: 50841940
Start: 502890
End: 503930
Strand: Direct
Name: 50841940
Synonym: PPA0457
Alternate gene names: NA
Gene position: 502890-503930 (Clockwise)
Preceding gene: 50841939
Following gene: 50841941
Centisome position: 19.64
GC content: 61.38
Gene sequence:
>1041_bases ATGGAGCCTCGCCGAGACGATTCAAGCAGCGTCGGCCGCAGGAGCCCTCGTCGCGACGCGGTTGGAGTGTTCCACCGCGA TGCCCTCGGAACCGGAACTGTTCGCGATGATGGCGAAACATCCGGACATTGCCATCAAAGAGGAGCATCTGTCATGACGC GCACCCCGCTTATTGACAAGCTGTTAGATCGGCGACTTGCCGATCCGGTGCGTTTTGCCGATCGCGTCCGGCAGCGTCCC CGAGCGACGTGGAGCCCCACTGAACCGCTGATGGTCGTCGCGGCTGATCATCCTGCTCGCGGTGCACTCGCAGCGGGAGG TCGTGCCGATGCCATGGCTGACCGGGAACACCTCCTCGAGCGCTGCGTGACCGCATTAGGACGTCCCGGGGTCAATGGGT TTCTGGGAACTGCCGACATGGTTGCCGACCTGGCGAACCTCGACGCTCTAGATGGCAAGGTTGTATTCGGTTCGATGAAC CGAGGAGGGTTCGCTGGAGCTTCCTTCGAGCTCGACGACCGAATGACGGGCTACGACGTGCAAGGAATCCTTGACGAGGA TCTGACCGGTGGCAAGATGCTGCTGAGGTTCGATCTATCCGACCCAGGTACGGCTACCACGGCACAGGCCTGTGCTGAGG CTGTGACGACTCTGGCCAGGGCGAGGCGAATTGCCATGGTGGAACCGTTCATCTCCTACCGTGCTGACGATGGCAAGGTC GTCAACGATCTTTCCGCTGACGCGGTTGTGAAATCGGTGGTCATGGCTTCGGGTCTTGGCGCCGATACCTCGTGGACCTG GCTCAAATTGCCCGCGGTTGACGATATGGAGCGGGTGGTACGAGCCACCTCGCTGCCCATTCTCCTGCTTGGGGGAGAGG TGAGCACGGATCCTGAGGAGACCCGGCGTCGTTGGGCCACGGCACTGGCCGCACGCCATGTCCGTGGACTCGTCTTGGGA CGATCGGTCCTCTATCCGCCGGACTCGGACGTGGCAACTGCCATTGACAACGCTGTTCAATTGTTGGGAGTACAAGCATG A
Upstream 100 bases:
>100_bases AGGAGCGCGTGGAGGTCGCCCCCACCCCAATCGACGTTACCAATGGCCTCGGAGCCGGAGATTCCTTCGGCGGCAGCCTA TGTCACGGGTTGCTAGAGGG
Downstream 100 bases:
>100_bases CGGAACTAGTTCTTCGATCTGGGAGCACTGCCTCGGGCTGTCGCGACGTTGTTGTTGACCCTAAGTGCGCTGGCTGGACG TACTCCGGTCTAACTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Aldolase; Deoxyribose-Phosphate Aldolase; Cytoplasmic Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MEPRRDDSSSVGRRSPRRDAVGVFHRDALGTGTVRDDGETSGHCHQRGASVMTRTPLIDKLLDRRLADPVRFADRVRQRP RATWSPTEPLMVVAADHPARGALAAGGRADAMADREHLLERCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMN RGGFAGASFELDDRMTGYDVQGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFISYRADDGKV VNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLGGEVSTDPEETRRRWATALAARHVRGLVLG RSVLYPPDSDVATAIDNAVQLLGVQA
Sequences:
>Translated_346_residues MEPRRDDSSSVGRRSPRRDAVGVFHRDALGTGTVRDDGETSGHCHQRGASVMTRTPLIDKLLDRRLADPVRFADRVRQRP RATWSPTEPLMVVAADHPARGALAAGGRADAMADREHLLERCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMN RGGFAGASFELDDRMTGYDVQGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFISYRADDGKV VNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLGGEVSTDPEETRRRWATALAARHVRGLVLG RSVLYPPDSDVATAIDNAVQLLGVQA >Mature_346_residues MEPRRDDSSSVGRRSPRRDAVGVFHRDALGTGTVRDDGETSGHCHQRGASVMTRTPLIDKLLDRRLADPVRFADRVRQRP RATWSPTEPLMVVAADHPARGALAAGGRADAMADREHLLERCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMN RGGFAGASFELDDRMTGYDVQGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFISYRADDGKV VNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLGGEVSTDPEETRRRWATALAARHVRGLVLG RSVLYPPDSDVATAIDNAVQLLGVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37068; Mature: 37068
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPRRDDSSSVGRRSPRRDAVGVFHRDALGTGTVRDDGETSGHCHQRGASVMTRTPLIDK CCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH LLDRRLADPVRFADRVRQRPRATWSPTEPLMVVAADHPARGALAAGGRADAMADREHLLE HHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH RCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMNRGGFAGASFELDDRMTGYDV HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCC QGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFISYRADDGKV CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLGGEVSTDPEE HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCHHH TRRRWATALAARHVRGLVLGRSVLYPPDSDVATAIDNAVQLLGVQA HHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEPRRDDSSSVGRRSPRRDAVGVFHRDALGTGTVRDDGETSGHCHQRGASVMTRTPLIDK CCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHH LLDRRLADPVRFADRVRQRPRATWSPTEPLMVVAADHPARGALAAGGRADAMADREHLLE HHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH RCVTALGRPGVNGFLGTADMVADLANLDALDGKVVFGSMNRGGFAGASFELDDRMTGYDV HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCC QGILDEDLTGGKMLLRFDLSDPGTATTAQACAEAVTTLARARRIAMVEPFISYRADDGKV CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VNDLSADAVVKSVVMASGLGADTSWTWLKLPAVDDMERVVRATSLPILLLGGEVSTDPEE HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCHHH TRRRWATALAARHVRGLVLGRSVLYPPDSDVATAIDNAVQLLGVQA HHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA