| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841918
Identifier: 50841918
GI number: 50841918
Start: 479075
End: 479764
Strand: Direct
Name: 50841918
Synonym: PPA0435
Alternate gene names: NA
Gene position: 479075-479764 (Clockwise)
Preceding gene: 50841917
Following gene: 50841920
Centisome position: 18.71
GC content: 62.9
Gene sequence:
>690_bases ATGGACCCCATGAACAGGTCATCGTCGAGTGCTGCGCTGCTTGTCGGCGCCGTCGCCGTGCCGATCGCCGTGTGTGCGGT GTTGAGCGCCCTCATTGACGTCTTCGTCGCTCCGGCAGCGGCCCTCGTGCTCGTCCTCGTCATTGTCATCGTTTGTCTGA GAGGGTCGTGGTTGGTCGACGCCCTCGTTATCGTCGTTAGTGCCATCGGCTTCGATTTCTTCCTCACCTACCCCTACCGG AGCATGAAGATCGCCTCGCGTCCCGACATCGAGGTGACGATTGTGCTCTTCGTCGTTGGTGCCGCGATCGCAGGCATTTC GCGGTGGGCACTGACGGCCTCAGATTTGGCTGAGCGACGACAGGGATATGTCACCTACGCTCTGGACGCGAGGTCGGGAG ACATGAGTCGTGACGAGGTTGCTCAGCGTCTGGCCGGTCTGGTCGGGGCTGAGGCCGGAGCTTGGGTGGACGGAGCTCCA CCTTCCGGGGAAGCTGTCATTCAAGACGCCACAGCCATGCGCACCGACGTCGGTCTGGAGGATCCCTCGCGGGTGGGATT CCCAACCGATCGCTTCATCTGTTTCCCCGCGGCCGGTGGTTACATCCGTATCTCGGCGGCATCGCGCCACGTGCGTCCCA CCGCCGAGCAGATGCGGGCTGCCTGCTTACTCGCTTCCCAGATCAGCTGA
Upstream 100 bases:
>100_bases GTCGTGGCGATGCTGTCCGACAATCCCTCGCCAGTTCCCTCGAATTGATGGTTAAAGTGCTGCGCAGCGATCTTGGCAGT CCGGGCGCAGCGGTGGTTCG
Downstream 100 bases:
>100_bases GTCCGCAGTGGGGGTAGCCGGGCATGTCACTCAGTGCGTTGCCAGGTCCACGCCACGACGGTGCGGGCTGGCTTCCAGCC GTGTAACCGACCGATGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MDPMNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVAPAAALVLVLVIVIVCLRGSWLVDALVIVVSAIGFDFFLTYPYR SMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERRQGYVTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAP PSGEAVIQDATAMRTDVGLEDPSRVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS
Sequences:
>Translated_229_residues MDPMNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVAPAAALVLVLVIVIVCLRGSWLVDALVIVVSAIGFDFFLTYPYR SMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERRQGYVTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAP PSGEAVIQDATAMRTDVGLEDPSRVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS >Mature_229_residues MDPMNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVAPAAALVLVLVIVIVCLRGSWLVDALVIVVSAIGFDFFLTYPYR SMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERRQGYVTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAP PSGEAVIQDATAMRTDVGLEDPSRVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24026; Mature: 24026
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPMNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVAPAAALVLVLVIVIVCLRGSWLVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ALVIVVSAIGFDFFLTYPYRSMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERR HHHHHHHHHHHHHEEECCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGYVTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAPPSGEAVIQDATAMRTDVGLE CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC DPSRVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS CCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDPMNRSSSSAALLVGAVAVPIAVCAVLSALIDVFVAPAAALVLVLVIVIVCLRGSWLVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ALVIVVSAIGFDFFLTYPYRSMKIASRPDIEVTIVLFVVGAAIAGISRWALTASDLAERR HHHHHHHHHHHHHEEECCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGYVTYALDARSGDMSRDEVAQRLAGLVGAEAGAWVDGAPPSGEAVIQDATAMRTDVGLE CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC DPSRVGFPTDRFICFPAAGGYIRISAASRHVRPTAEQMRAACLLASQIS CCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA