| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841861
Identifier: 50841861
GI number: 50841861
Start: 424584
End: 425408
Strand: Reverse
Name: 50841861
Synonym: PPA0378
Alternate gene names: NA
Gene position: 425408-424584 (Counterclockwise)
Preceding gene: 50841863
Following gene: 50841860
Centisome position: 16.62
GC content: 62.91
Gene sequence:
>825_bases TTGGCGGAGCTGGCACACCGTCACAACATCATTGACGGCGTCGTCCACGACAAGCTTTACCTGCCTGGCCTGGTGAAGCT GCGTCGTCTGGTCGACATGGGATTCTTCGGACGCATCCTCTCCATGCGCGGCGAATTCGGATACTGGGTGTGGGAAGGCA CCGACGTTCCCTCCCAGCGACCGTCATGGAACTACCGCAAGACTGACGGCGGCAGCATGACGACCGACATGTACCCGCAC TGGAACTACGTCATCGAGGGCATCATCGGACAGACCCGGGACGTCTACTCCCAGACCGCCACTCACATCACCAAGCGCGT GGATGAGCAGGGCAACATCTACAACGCGGACACCGACGATGCCGCTTACGCCATCTTCAACGTCGTCACACCCTCCGGGG ACCCAGTCATCGTGCAGATGAACTCCTCGTGGGCGACCCGCGTCTTCCGCGACGAACTGCTCGAGTTCCAGATCGACGGC ACCCACGGCTCCGCCGTCGCAGGCCTGTTCGGATGCGTCTGCCAGCCCCGCGGGGTCACCCCCCCCCCCGCCCGACCTGG AATCCCGACATCCCTGACACTAATGACTACATGTCGATGTGGCAGGAGGTTCCCGACAACGCCGCCACTGCCACCGGCAG CCTCGACAACGGTTTCAAGGCACAGTGGGAGGAATACCTCACCGACGTCGCGATGGATCGTCGGCACCGCTTCGACCTGC TGTCGGGAGCACGCGAAGTCCAACTTGCCGAACTCGGATTGCGGTCGGCCGCCGAGGGACGACGCGTTTACGTCCCCGAG ATCGTGGTGGACCAGCGATGAGTGA
Upstream 100 bases:
>100_bases GACGTCACGTCGCTACCGAGCTCTGCGCACCGCCATCGAGGCCGGCAAGAACATCTACACCGAGAAGCCCACTGCCGAGA CCCTCGACGAGGCCATCGAG
Downstream 100 bases:
>100_bases CCTCTCGAGGCTGTCCCTCAACACTGCGACGGCCAAGCACGCGACCCTGGCAGAGTGCACCTCCGCATGTGCCGAAGCCG GCCTGGGATGGATCGGCCCC
Product: putative oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase Domain Protein; Oxidoreductase Protein; Gfo/Idh/MocA Family Oxidoreductase; Dehydrogenase; Oxidoreductase Gfo/Idh/MocA Family Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAELAHRHNIIDGVVHDKLYLPGLVKLRRLVDMGFFGRILSMRGEFGYWVWEGTDVPSQRPSWNYRKTDGGSMTTDMYPH WNYVIEGIIGQTRDVYSQTATHITKRVDEQGNIYNADTDDAAYAIFNVVTPSGDPVIVQMNSSWATRVFRDELLEFQIDG THGSAVAGLFGCVCQPRGVTPPPARPGIPTSLTLMTTCRCGRRFPTTPPLPPAASTTVSRHSGRNTSPTSRWIVGTASTC CREHAKSNLPNSDCGRPPRDDAFTSPRSWWTSDE
Sequences:
>Translated_274_residues MAELAHRHNIIDGVVHDKLYLPGLVKLRRLVDMGFFGRILSMRGEFGYWVWEGTDVPSQRPSWNYRKTDGGSMTTDMYPH WNYVIEGIIGQTRDVYSQTATHITKRVDEQGNIYNADTDDAAYAIFNVVTPSGDPVIVQMNSSWATRVFRDELLEFQIDG THGSAVAGLFGCVCQPRGVTPPPARPGIPTSLTLMTTCRCGRRFPTTPPLPPAASTTVSRHSGRNTSPTSRWIVGTASTC CREHAKSNLPNSDCGRPPRDDAFTSPRSWWTSDE >Mature_273_residues AELAHRHNIIDGVVHDKLYLPGLVKLRRLVDMGFFGRILSMRGEFGYWVWEGTDVPSQRPSWNYRKTDGGSMTTDMYPHW NYVIEGIIGQTRDVYSQTATHITKRVDEQGNIYNADTDDAAYAIFNVVTPSGDPVIVQMNSSWATRVFRDELLEFQIDGT HGSAVAGLFGCVCQPRGVTPPPARPGIPTSLTLMTTCRCGRRFPTTPPLPPAASTTVSRHSGRNTSPTSRWIVGTASTCC REHAKSNLPNSDCGRPPRDDAFTSPRSWWTSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30464; Mature: 30332
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELAHRHNIIDGVVHDKLYLPGLVKLRRLVDMGFFGRILSMRGEFGYWVWEGTDVPSQR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC PSWNYRKTDGGSMTTDMYPHWNYVIEGIIGQTRDVYSQTATHITKRVDEQGNIYNADTDD CCCCCEECCCCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCCC AAYAIFNVVTPSGDPVIVQMNSSWATRVFRDELLEFQIDGTHGSAVAGLFGCVCQPRGVT CEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCC PPPARPGIPTSLTLMTTCRCGRRFPTTPPLPPAASTTVSRHSGRNTSPTSRWIVGTASTC CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECHHHH CREHAKSNLPNSDCGRPPRDDAFTSPRSWWTSDE HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AELAHRHNIIDGVVHDKLYLPGLVKLRRLVDMGFFGRILSMRGEFGYWVWEGTDVPSQR CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC PSWNYRKTDGGSMTTDMYPHWNYVIEGIIGQTRDVYSQTATHITKRVDEQGNIYNADTDD CCCCCEECCCCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCCC AAYAIFNVVTPSGDPVIVQMNSSWATRVFRDELLEFQIDGTHGSAVAGLFGCVCQPRGVT CEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCC PPPARPGIPTSLTLMTTCRCGRRFPTTPPLPPAASTTVSRHSGRNTSPTSRWIVGTASTC CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECHHHH CREHAKSNLPNSDCGRPPRDDAFTSPRSWWTSDE HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA