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The map label for this gene is 50841802

Identifier: 50841802

GI number: 50841802

Start: 367125

End: 368012

Strand: Direct

Name: 50841802

Synonym: PPA0315

Alternate gene names: NA

Gene position: 367125-368012 (Clockwise)

Preceding gene: 50841797

Following gene: 50841803

Centisome position: 14.34

GC content: 57.77

Gene sequence:

>888_bases
GTGCCTGACTGTTTCGGACTTTCTGAAACGACGACCACGTCTGCCTCAGTCGCCCCCCGTGTGACGTTGTCGACGACCTC
GGTCTACCCTGAGTCGACCGCCGACGCTTTCGCTCGCGCTAAGGCTATCGGTTATGACGGAGTCGAGTTGATGGTCGGTA
TCGATCCAGTCGCCGCAGACGTTGACCGGATCGTCGATTTGTCGGCTGAGTATGGCGTCACAGTGTCGTCGATCCATGCG
CCGTGTCTGCTCGTTACGCCAAATGTGTGGGGTAGTGACCCGTGGGGCAAGTTGGATAACGCCGCCGAAGCTGCTGGACG
GCTCGGCTCCAAGCTCATTGTCGTTCACCCTCCCTTCCGCTGGCAGCGTGACTATGCGGGTAGATTTGAAGAAGGTATTG
CCAAATTCAACGAGAAGTACTTCCCGCTCGTCTTTGCCGTAGAAAACATGTATCCGTGGCGTACTCCAGCGGGTCGCTTT
GCTGCTTATTCGCCGGGGTTTGACCCCACAAACCTCAGTTACGACCACCTCGTCTTGGACCTCTCTCACGCCGCAACCGC
CCAGATGAACTCTCGTACCCTGGTTGATCTGTGGGGTTCACGATTGCGTCACATCCACCTGACGGACGGCTCTGGTACCT
TTAAGGACGAGCATCTTTTACCCGGCCAGGGAAACCAGCATGCCTGGGAGGTCATCGAGCGAGCGGTAACGGGTGGATTT
GACGGGGACATTGTGTTAGAGGTCAACACTCGTAAGTTCTCTGGCGAGGGTGCGGGCCAAGGTGCTCGCTTCGAAGCATT
GTCTGAAACTCTGACGCAGACCAGGTTGGCGATTGATCGTGGCATCTTTGCTCGCCGATCTGGCCAGGCGTGGGAAGGGG
CCCGGTAG

Upstream 100 bases:

>100_bases
CTGTCGTAATGGGGTCTAGCATCACGATTCATTGTGACGTGAGCGCAGCGCATCCGGTGCCTCCGTCACGGTATCGGTTT
GGGCACGGTAGGTTGAGCAT

Downstream 100 bases:

>100_bases
TGACGGAGAGTCGACATGATTTCCGGGGCAGAGCTCTGCTGGCATCGGGTCGACGTCTTGCGATGCGATTGGCGATGGAC
CCCACGATCGCTCACAAGGT

Product: putative AP endonuclease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAADVDRIVDLSAEYGVTVSSIHA
PCLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFRWQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRF
AAYSPGFDPTNLSYDHLVLDLSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGF
DGDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR

Sequences:

>Translated_295_residues
MPDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAADVDRIVDLSAEYGVTVSSIHA
PCLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFRWQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRF
AAYSPGFDPTNLSYDHLVLDLSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGF
DGDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR
>Mature_294_residues
PDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAADVDRIVDLSAEYGVTVSSIHAP
CLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFRWQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRFA
AYSPGFDPTNLSYDHLVLDLSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGFD
GDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML2432 and M.tuberculosis Rv0498 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 32134; Mature: 32003

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAAD
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHH
VDRIVDLSAEYGVTVSSIHAPCLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFR
HHHHHHCCHHCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
WQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRFAAYSPGFDPTNLSYDHLVLD
CCCHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEE
LSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGF
CCHHHHHHCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
DGDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR
CCEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCC
>Mature Secondary Structure 
PDCFGLSETTTTSASVAPRVTLSTTSVYPESTADAFARAKAIGYDGVELMVGIDPVAAD
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHH
VDRIVDLSAEYGVTVSSIHAPCLLVTPNVWGSDPWGKLDNAAEAAGRLGSKLIVVHPPFR
HHHHHHCCHHCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
WQRDYAGRFEEGIAKFNEKYFPLVFAVENMYPWRTPAGRFAAYSPGFDPTNLSYDHLVLD
CCCHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEE
LSHAATAQMNSRTLVDLWGSRLRHIHLTDGSGTFKDEHLLPGQGNQHAWEVIERAVTGGF
CCHHHHHHCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
DGDIVLEVNTRKFSGEGAGQGARFEALSETLTQTRLAIDRGIFARRSGQAWEGAR
CCEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]