| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yhaM [C]
Identifier: 50841710
GI number: 50841710
Start: 272440
End: 272847
Strand: Reverse
Name: yhaM [C]
Synonym: PPA2396
Alternate gene names: 50841710
Gene position: 272847-272440 (Counterclockwise)
Preceding gene: 50841711
Following gene: 50841709
Centisome position: 10.66
GC content: 62.99
Gene sequence:
>408_bases ATGCAGAAAACACGATGTCAAACCCCGCTTTCTCCCTCTGAGATCAACAACCTCATTGAGGCCCTCCACCAGGGCGTGAC CCCAGCCACCGGCTGCACCGAACCGATTGCCTTGGCCTATGCCGCAGCGCGCGCCAAACGAGCTCTTGGAAGCGACGCGA AACAACTCGACTCTCTCCACATTGACGCTCGGGTATCCCCCAACATTATGAAGAACGGCATGGCCGTCATGGTCCCCCGG CACCGGACGGCCCGGCCTCGAGATCGCCGCAGCGGTGGGAGCCCTCGCAGGCAACCCCGATGCGGGGCTAGCGGTCCTGG CCGACGTCAGCGAAGACGCGGCAGAGAAGGCGCGTCACCTAGTCGATTCAGGAGCCGTCGAACTCACTGTGGCCGATGTG GACGATGA
Upstream 100 bases:
>100_bases TCTTCTAGTTGTCTCGCCATTCCTGGCTTTCAGCTAATTCTTATCAGAAAGGTTGATCATGACACCCTTGGCGACCGAAG GAGTCCGGAATGCCGACTCG
Downstream 100 bases:
>100_bases CCTCTATGCCGAAACCGTCCTTCACCTCGATGGTCACCACGCTCGAGCCTGTATTGCAGGCGACCACACAAACGTATTCC TTGTCAGCCGCGACGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLHIDARVSPNIMKNGMAVMVPR HRTARPRDRRSGGSPRRQPRCGASGPGRRQRRRGREGASPSRFRSRRTHCGRCGR
Sequences:
>Translated_135_residues MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLHIDARVSPNIMKNGMAVMVPR HRTARPRDRRSGGSPRRQPRCGASGPGRRQRRRGREGASPSRFRSRRTHCGRCGR >Mature_135_residues MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLHIDARVSPNIMKNGMAVMVPR HRTARPRDRRSGGSPRRQPRCGASGPGRRQRRRGREGASPSRFRSRRTHCGRCGR
Specific function: Unknown
COG id: COG3681
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14833; Mature: 14833
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLH CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHC IDARVSPNIMKNGMAVMVPRHRTARPRDRRSGGSPRRQPRCGASGPGRRQRRRGREGASP CCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCH SRFRSRRTHCGRCGR HHHHHHHHCCCCCCC >Mature Secondary Structure MQKTRCQTPLSPSEINNLIEALHQGVTPATGCTEPIALAYAAARAKRALGSDAKQLDSLH CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHC IDARVSPNIMKNGMAVMVPRHRTARPRDRRSGGSPRRQPRCGASGPGRRQRRRGREGASP CCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCH SRFRSRRTHCGRCGR HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA