| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841702
Identifier: 50841702
GI number: 50841702
Start: 261018
End: 262853
Strand: Reverse
Name: 50841702
Synonym: PPA0210
Alternate gene names: NA
Gene position: 262853-261018 (Counterclockwise)
Preceding gene: 50841709
Following gene: 50841694
Centisome position: 10.27
GC content: 63.45
Gene sequence:
>1836_bases ATGGCGGAGAAGCGGTCGGGTGCTCGTAGCGGATCCGCGTCCCGAAATCATTTGCGCTCCTGGCACGGCGACGACCCGAT CCCACGAACTGCTGACGGCATTGACGCCCGTATTTTCCGTCCAGGCCAGGCCTCCGCCCAGCCCGCTACCCCACCACAGT CGAGTGCCACCCCTTCTAAACCCCCGGTCGATGAGGATAACCCGACGAAGATAGCCCCGGTAGGCAGCCTTTCGAGGTCG TGGCCCCTGACCCGTTCAAGGACGACCTCTCCCCACAATGGCCAAGCCAAACTCCGCCATTCCAGGCCACCAAGGGCGCA CCGAACCCGACGCGTCCCGCTAGAAAAACTCTTTCGCGCCAGGACACCGGTAGAGCCGACTCTGGCTCTCAACCTGGGCG ACGCTGAGATGGCGATCATGCAAGCTCGACGTGTCGTCGACCTCGTCACCCGCGTCGCGGTGATGGCGATCTCGGTTGGA GGTTCCGCGTCTGAGGCCGTCGCAATAGCCCTGCGCATCACCGCGACCTACGGAGTGACCGTCCACATCGATATTACGAA CACGTCCGTCATCGTCACCCAGCATCGTGGACTGGACGAAGACCCCATCACCGCGTTGCGGGTGGTTCGTTCCCGCAGCA ACGATTACCAGCGCCTGGGCGAACTGCAGTTGCTCGTCGATGACATTTGCGACAAGACCGTAAGTCTCGAGGAGGCCGCC GACCGCTTGGCCGCCATCACGCGCAGCCCCCGGTTGTACCGTCAATGGTTCGTCACTATGAACATTGGTCTCATGGGGGC AGGGCTGTCTACCTTGTTCGGCGGTACCGTCATGGACGGCGTGCTGAGCTTCTTCTCGACGTGCATCGTTGACGCCACCG TTCAGGCGATGGCGCGCAAGCGGATCACGAATTTCTTTGCTCAAGCGGCCGGTGGCGCCATCGCGACCGCGTTCGCCCTT ATCGTCATGGTGTACATGGCGGCTTCCAATCACCCTCTGCCGCTGTCTCCTTCCCTCATCGTCGCCGCCGGAATCGTCTC CCTGCTGGCCGGCGGCTCTTTCGTCGCGGCCTCCCAGGACGCCCTCGACGGCTACGTCGTCACAAGTTCCGGACGATTCC TGGAAGGGTTTGTACAAACCGGTGGCGTCATCCTCGGCGTCATCACGGCGATGTGGATCGGACTGAGGCTCGGAGTGCCC GGGTACATCTCGCCCGCCCTGGGGTTCTCCACCAACCCGGTCCTCCAGATGGTCGCTGCCGCGGTCATCGCCGTGACCTT CGGCGTTTCTTCTCACGCTGGATACCGCACCCTGGCGATCTGTGCGGCCTTGGGGGCAGCAGCCTGGGCCGGATACCTCC TCGGCATGCAGTTGACGGGATCTGTGTCAGCAGCGTCAGGACTCGCAGCCATGGTGGCAGGCTTTATCGCAGGCCTAGGA GCGAAGCGCTGGAAGGTACCTCAGCTAGGTTTGGTGACGATCGCCATCGTCCCCCTCATGCCCGGCGTCATGATGTACCG AGCCCTGTACATGATCGTCAATGCGCAAAACGAAACCGGCGGCACCTCGAGCGCTGGGTGGACCCTCTTTCTAGAGGCCT TGCTCGTCGGTGTGGCGCTAGCCGTCGGAGGCAGCTTCGGCGCGCTGCTGGCCCGTCCATTCACTCTCCCGAAGGATCTG CGGTCCCGGTTGGCGACCCTCGCTTCCTGGGGTGCTGGTCAAGCCGTCCCGCGTGAACGGCGCCGTCGGCGATCCCAGCC CCCGGCGGATCCGCACCATCCAGCTCTCAACAACACTGAGACTGACCCGACTGTGACGGGAACTTGGGCACGGTAG
Upstream 100 bases:
>100_bases TATCGACAAGTCCCGAATCCGTCCCCGTTTGGGTACCGTCGGTAAAGACCATCACAATGGTCCTGCAGGGCGTTCCTGCG TGGCGCGAGGAGGGTGTCAG
Downstream 100 bases:
>100_bases GCGTCAGTCCAGTCTCTGCATCCGTGGTCGCGGCACTGGTACGGCGACCATCGTCACTAAAGCCAGCAACACCGGCGGGG CGAACACGATGAGCGCCAGC
Product: membrane spanning protein
Products: NA
Alternate protein names: Transmembrane Protein; Threonine Export Protein; Integral Membrane Protein; Membrane Spanning Protein
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MAEKRSGARSGSASRNHLRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPSKPPVDEDNPTKIAPVGSLSRS WPLTRSRTTSPHNGQAKLRHSRPPRAHRTRRVPLEKLFRARTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVG GSASEAVAIALRITATYGVTVHIDITNTSVIVTQHRGLDEDPITALRVVRSRSNDYQRLGELQLLVDDICDKTVSLEEAA DRLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARKRITNFFAQAAGGAIATAFAL IVMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQDALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVP GYISPALGFSTNPVLQMVAAAVIAVTFGVSSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLG AKRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSSAGWTLFLEALLVGVALAVGGSFGALLARPFTLPKDL RSRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTETDPTVTGTWAR
Sequences:
>Translated_611_residues MAEKRSGARSGSASRNHLRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPSKPPVDEDNPTKIAPVGSLSRS WPLTRSRTTSPHNGQAKLRHSRPPRAHRTRRVPLEKLFRARTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVG GSASEAVAIALRITATYGVTVHIDITNTSVIVTQHRGLDEDPITALRVVRSRSNDYQRLGELQLLVDDICDKTVSLEEAA DRLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARKRITNFFAQAAGGAIATAFAL IVMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQDALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVP GYISPALGFSTNPVLQMVAAAVIAVTFGVSSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLG AKRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSSAGWTLFLEALLVGVALAVGGSFGALLARPFTLPKDL RSRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTETDPTVTGTWAR >Mature_610_residues AEKRSGARSGSASRNHLRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPSKPPVDEDNPTKIAPVGSLSRSW PLTRSRTTSPHNGQAKLRHSRPPRAHRTRRVPLEKLFRARTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVGG SASEAVAIALRITATYGVTVHIDITNTSVIVTQHRGLDEDPITALRVVRSRSNDYQRLGELQLLVDDICDKTVSLEEAAD RLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARKRITNFFAQAAGGAIATAFALI VMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQDALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVPG YISPALGFSTNPVLQMVAAAVIAVTFGVSSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLGA KRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSSAGWTLFLEALLVGVALAVGGSFGALLARPFTLPKDLR SRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTETDPTVTGTWAR
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64474; Mature: 64343
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKRSGARSGSASRNHLRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPSK CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC PPVDEDNPTKIAPVGSLSRSWPLTRSRTTSPHNGQAKLRHSRPPRAHRTRRVPLEKLFRA CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCHHHHHHH RTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVGGSASEAVAIALRITATYGVT CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEE VHIDITNTSVIVTQHRGLDEDPITALRVVRSRSNDYQRLGELQLLVDDICDKTVSLEEAA EEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHH DRLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARK HHHHHHHCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RITNFFAQAAGGAIATAFALIVMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQD HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCC ALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVPGYISPALGFSTNPVLQMVAA CCCCEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH AVIAVTFGVSSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC AKRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSSAGWTLFLEALLVGVAL CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHH AVGGSFGALLARPFTLPKDLRSRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTE HHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC TDPTVTGTWAR CCCCCCCCCCC >Mature Secondary Structure AEKRSGARSGSASRNHLRSWHGDDPIPRTADGIDARIFRPGQASAQPATPPQSSATPSK CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC PPVDEDNPTKIAPVGSLSRSWPLTRSRTTSPHNGQAKLRHSRPPRAHRTRRVPLEKLFRA CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCHHHHHHH RTPVEPTLALNLGDAEMAIMQARRVVDLVTRVAVMAISVGGSASEAVAIALRITATYGVT CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEE VHIDITNTSVIVTQHRGLDEDPITALRVVRSRSNDYQRLGELQLLVDDICDKTVSLEEAA EEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHH DRLAAITRSPRLYRQWFVTMNIGLMGAGLSTLFGGTVMDGVLSFFSTCIVDATVQAMARK HHHHHHHCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RITNFFAQAAGGAIATAFALIVMVYMAASNHPLPLSPSLIVAAGIVSLLAGGSFVAASQD HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCC ALDGYVVTSSGRFLEGFVQTGGVILGVITAMWIGLRLGVPGYISPALGFSTNPVLQMVAA CCCCEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH AVIAVTFGVSSHAGYRTLAICAALGAAAWAGYLLGMQLTGSVSAASGLAAMVAGFIAGLG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC AKRWKVPQLGLVTIAIVPLMPGVMMYRALYMIVNAQNETGGTSSAGWTLFLEALLVGVAL CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHH AVGGSFGALLARPFTLPKDLRSRLATLASWGAGQAVPRERRRRRSQPPADPHHPALNNTE HHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC TDPTVTGTWAR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA