| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841689
Identifier: 50841689
GI number: 50841689
Start: 243747
End: 244361
Strand: Reverse
Name: 50841689
Synonym: PPA2368
Alternate gene names: NA
Gene position: 244361-243747 (Counterclockwise)
Preceding gene: 50841690
Following gene: 50841688
Centisome position: 9.54
GC content: 52.36
Gene sequence:
>615_bases ATGGGCAACTACCACTGGATAACATCACCCGGGCCCCACAACGCCGAAACCTACCTAGAGCAAGTAGGCGGAGAAACACT CAGCGGTGCCGCCTTCGGAGGCATCACCGCCACGATAGGAGGAAAAACATACGACACACTCCCAGACTCAATACCCACCG GACACTTCGGACCCCATAACACAGCCCTTGGAGTTAGGAAAGAGCCAACAACCTTCCTCGCACGATACCACAGAAATGGC CAGTTAAACCTAAGTCAGGCAACATCATTCCGTGGAGCCACATTCAAAAGCAAGATCGCCATAAAACCCATCACAACCTA CCGTAGCTGGAGTAATCCAGACTACGAGGTCGGCAGCTACGTGTCCCGGACACGACCAGCAGGACCCCTCCAAACTCAAC TCGACTTGGCACTTGCCCCCCAATGGAGGAATACTGCTGAAAATGTAACAAAACTCGAAATACCTCGATTCGCGCCGTTC TACGAAGGTGCAGCCGGAGTGCAACCCGCCAAAGCCATCGAAGACTCAGACACCTTAGGCCAATTACCCGGAGGCGGAAA CCAAATACTCATCACCGACGAACAGGTGAAAAATCAATGGAAAACGAAGAAATAG
Upstream 100 bases:
>100_bases CTGGAACCCATCGCAGGCCCCATATCCGGCAAAATCGCAGGTCCCGGAACTCAAACTCTCCTCTCCCGCGGGATAGAAGC CGGCAACCCAAGGCTACGTG
Downstream 100 bases:
>100_bases AAGCACCGTACAGAATCATTAGCCTTTCGGAAATCGGACCGCTCGTGCTAGGAAAATGGTCCCAAATTTACGTCGGTTCT AAATGCATCGGAAGGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHNTALGVRKEPTTFLARYHRNG QLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSYVSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPF YEGAAGVQPAKAIEDSDTLGQLPGGGNQILITDEQVKNQWKTKK
Sequences:
>Translated_204_residues MGNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHNTALGVRKEPTTFLARYHRNG QLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSYVSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPF YEGAAGVQPAKAIEDSDTLGQLPGGGNQILITDEQVKNQWKTKK >Mature_203_residues GNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHNTALGVRKEPTTFLARYHRNGQ LNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSYVSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPFY EGAAGVQPAKAIEDSDTLGQLPGGGNQILITDEQVKNQWKTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22188; Mature: 22057
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHN CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC TALGVRKEPTTFLARYHRNGQLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSY CCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHH VSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPFYEGAAGVQPAKAIEDSDTLG HHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC QLPGGGNQILITDEQVKNQWKTKK CCCCCCCEEEEEHHHHHHHCCCCC >Mature Secondary Structure GNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHN CCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC TALGVRKEPTTFLARYHRNGQLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSY CCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHH VSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPFYEGAAGVQPAKAIEDSDTLG HHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC QLPGGGNQILITDEQVKNQWKTKK CCCCCCCEEEEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA