| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841599
Identifier: 50841599
GI number: 50841599
Start: 130239
End: 131012
Strand: Reverse
Name: 50841599
Synonym: PPA0108
Alternate gene names: NA
Gene position: 131012-130239 (Counterclockwise)
Preceding gene: 50841600
Following gene: 50841598
Centisome position: 5.12
GC content: 65.63
Gene sequence:
>774_bases ATGACCGCCCCGAACCGCGTTCCCTCCCGGTGCTTGTCCATCACCCGACTACGCGACCTACTGCTGGCCGATATCCCGGC CTCCCGTCTGGTCATCGCCTGTGACACGATCGGCGGCATCGGGCCGCGTCCCGACGATTCCTATCCGGCCGACCCGGTGT GGTGCGCCCACTTGGGAGCGCGAGTGCCGCTGCTGGAGGTGCTGTGCGCCGGTGCGCGTCCGCTTGTCCTCGTCGACACA CTGTGCCAGGACAGTGCATCTGCTCAGCCCATGATTGCCGAATTCCGACGCTGTGCGCTCGACGCCGGGATCGACCCAGA TGCGGTTACCGGATCGACGGAGGACAACGTCGCCACCACCCAAACCGGCGTCGGGGTGACGATTATCGGCGTCATGCACC ACGAGGATGTGCCGAAGTCCCTAGACGGAGACGTCTTGGTGTGTGTCGGCGCTCCGATCTCGGCCCCTAACGACGACGTC GCCCTTGGTCGGCGCGAGATTGTGGGCGTCACGGAGGTTAAGGCACTAATGGCTTCGGGGAAGGTGCACGACTGCGTCCC GGTCGGGTCTCATGGGGTGGCCTGGGAGGCCAAACAGCTGGCCTCCACTGCGGGACTGCGCGTCGCATTCCAACCCACCG ACGTCGACCTAACCCGCTCCGGCGGCCCGGCCACATGCGTCGTCATGGCCTGTGCCAAAACCAATCTTGAGCAGTTGCAC GCCCTGGTCAATCCGGAACGACCGTGGGCAGTCATCGGGCACCTGCGCTCCTGA
Upstream 100 bases:
>100_bases CGGTAGTTGGCTGTTGTCGAAGCTGTTGAAGAACACCTACTACGAGGACATCCTGCCGTGACGTCCTGACGATGCGGTTT CGGGGCGGTTGAATAACACC
Downstream 100 bases:
>100_bases CGATTCGCTACCTGGAACTACCTGCAGCATTTTCCATCCCCCGCGACGAACCCCATATGCATGGTGTTAGTGTGCGATTG CCTCGAGTCGGATTCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGARVPLLEVLCAGARPLVLVDT LCQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATTQTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDV ALGRREIVGVTEVKALMASGKVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLH ALVNPERPWAVIGHLRS
Sequences:
>Translated_257_residues MTAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGARVPLLEVLCAGARPLVLVDT LCQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATTQTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDV ALGRREIVGVTEVKALMASGKVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLH ALVNPERPWAVIGHLRS >Mature_256_residues TAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGARVPLLEVLCAGARPLVLVDTL CQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATTQTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDVA LGRREIVGVTEVKALMASGKVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLHA LVNPERPWAVIGHLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26869; Mature: 26738
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCC RVPLLEVLCAGARPLVLVDTLCQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATT CCHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE QTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDVALGRREIVGVTEVKALMASG CCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHCCHHHHCCHHHHHHHHHCC KVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLH CCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCEEECCCCCEEEEEEEHHHCCHHHHH ALVNPERPWAVIGHLRS HHHCCCCCEEECCCCCC >Mature Secondary Structure TAPNRVPSRCLSITRLRDLLLADIPASRLVIACDTIGGIGPRPDDSYPADPVWCAHLGA CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCC RVPLLEVLCAGARPLVLVDTLCQDSASAQPMIAEFRRCALDAGIDPDAVTGSTEDNVATT CCHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE QTGVGVTIIGVMHHEDVPKSLDGDVLVCVGAPISAPNDDVALGRREIVGVTEVKALMASG CCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHCCHHHHCCHHHHHHHHHCC KVHDCVPVGSHGVAWEAKQLASTAGLRVAFQPTDVDLTRSGGPATCVVMACAKTNLEQLH CCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCEEECCCCCEEEEEEEHHHCCHHHHH ALVNPERPWAVIGHLRS HHHCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA