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The map label for this gene is 50841598

Identifier: 50841598

GI number: 50841598

Start: 128687

End: 129955

Strand: Reverse

Name: 50841598

Synonym: PPA0107

Alternate gene names: NA

Gene position: 129955-128687 (Counterclockwise)

Preceding gene: 50841599

Following gene: 50841597

Centisome position: 5.08

GC content: 62.17

Gene sequence:

>1269_bases
GTGAGTACTCCGAGAACGATGCCGAGGAGGATCTCGGCCCTCATTACCCTCTTCGTCGCACCCGCCCTGGCCCTGACGGG
CTGCTCGGGTTCGAGCAACAGAACCACCTCACTGAACACCTCGACAGCCACCCCGTCAGTCGGCACCGGTGCCAACATGT
CGGGGTGCATCAAGTCTGGGGAGTTCGACAAGGACAAGGATTACTTCGGCGACAAGGCCACCTTCACCGGGGCCAGGAAC
GTCCACGTCAGCTACCACAAGTCCTACAAGGTTCTCACCCTCGGTGAGCAGGACAGGCCGGCACAGACCTTCGTGCTGCT
GCAGTGCGGTGCCCCCAAGCCGGCACTCACTGGTGACCTCGCCAAGGCCCCGATCATCGACGTCCCGGTCAAACGGGTCG
TCGCCTCCTCCACCACCCAGATTCCGGTCTTCCACACCTTGGGGGCCCTGGACTCTATCGTCGGCGTCAACCAGATCGAG
CAGATCTATCGCGGACCGGCACGTAAGGCCCTTGAGGCCCGCCACATACCAAGCTACGGATCGAGCAGGATGCAGATCGA
CACAGAGAAGATCATCTCCCTCAAACCCGACGCCGTGCTGGCTGCCAGCTCAGAGGTGGGAGAGTTCAAGCAGGTGCAGT
CCGCCGGCATCCCGGTGCTGCAAGACCTCGACTACCTCGAGTCCACCCCGCTGGCTCGGGCCGAGTGGATGAAGGCCTAC
GGCATCCTTCTCAACAAGGAGGGCGCCGCCACGAAGAGTTTCGACAGCATCGCCGAGCGTTACGCCGAGGTGGCGAAGAA
GGCCAAGAACGCTGCCGACAAACCCAGCGTGCTCGTCGGTCAGGAGACCAAGGGGCAGTGGTACGTCCCGGGGGCCGACT
CCTACATGATCAAGTTCATGACCGACGCCGGAGCTTCCGACGTCATGGCCCAGGCCGTCAAGGGCAACGGAGCCACCCCA
ACCGACGCCGAGGTCGTCTTCAAGTACGGTTCCAAGGCCGACTTCTGGCTCAACGGCAACTACATGTCCATGACGACGTG
GCACGGCAAGGATGACGCCCTCAAGCAGAACCCGCGCTACGCGAACCTGTCGGCCTTTCAGCATGGCAACGTCTGGAACC
CCAGCAAACGCACTGCCCCAGACACCGGAAACGACTTCTGGCAGTCCGGGATCGTCCAGCCCGACGTCGTACTGGCTGAC
CTCACCTACATCTTCCACCCAGACCTCATGAAGGGGTACACCCCGTACTACTACACCAAGCTCAGCTGA

Upstream 100 bases:

>100_bases
TCTCTGAGGAGTGGCAGTTGTTAACTCTCGCCGTAGGAGTCTGCCGGGCACACTATGTGCGCCTCAGCGAAACCTGCGGC
ATGACCGCAGGGAGAACCGC

Downstream 100 bases:

>100_bases
TCCCTCGACGGCGTTGCTCGCCGCACACCCTCCCTTCACCATTTTCTGGAGCAAACATGTCCATCAATCGTCTGGTGGCG
GGTCTGGCCGCCACCACCAT

Product: periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSTPRTMPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSGEFDKDKDYFGDKATFTGARN
VHVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDLAKAPIIDVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIE
QIYRGPARKALEARHIPSYGSSRMQIDTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAY
GILLNKEGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFMTDAGASDVMAQAVKGNGATP
TDAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRYANLSAFQHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLAD
LTYIFHPDLMKGYTPYYYTKLS

Sequences:

>Translated_422_residues
MSTPRTMPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSGEFDKDKDYFGDKATFTGARN
VHVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDLAKAPIIDVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIE
QIYRGPARKALEARHIPSYGSSRMQIDTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAY
GILLNKEGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFMTDAGASDVMAQAVKGNGATP
TDAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRYANLSAFQHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLAD
LTYIFHPDLMKGYTPYYYTKLS
>Mature_421_residues
STPRTMPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSGEFDKDKDYFGDKATFTGARNV
HVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDLAKAPIIDVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIEQ
IYRGPARKALEARHIPSYGSSRMQIDTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAYG
ILLNKEGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFMTDAGASDVMAQAVKGNGATPT
DAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRYANLSAFQHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLADL
TYIFHPDLMKGYTPYYYTKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 45765; Mature: 45634

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRTMPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSG
CCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCC
EFDKDKDYFGDKATFTGARNVHVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDL
CCCCCHHHCCCCCEECCCCEEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
AKAPIIDVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIEQIYRGPARKALEARHIPSYG
CCCCEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
SSRMQIDTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAY
CCCEEECHHHHEEECCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
GILLNKEGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFM
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCCEEEEEE
TDAGASDVMAQAVKGNGATPTDAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRY
ECCCHHHHHHHHHCCCCCCCCCHHEEEEECCCCEEEECCCEEEEEEECCCCCHHHCCCCC
ANLSAFQHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLADLTYIFHPDLMKGYTPYYYTK
CCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHEEHHHHHHCCHHHHCCCCCEEEE
LS
CC
>Mature Secondary Structure 
STPRTMPRRISALITLFVAPALALTGCSGSSNRTTSLNTSTATPSVGTGANMSGCIKSG
CCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCC
EFDKDKDYFGDKATFTGARNVHVSYHKSYKVLTLGEQDRPAQTFVLLQCGAPKPALTGDL
CCCCCHHHCCCCCEECCCCEEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC
AKAPIIDVPVKRVVASSTTQIPVFHTLGALDSIVGVNQIEQIYRGPARKALEARHIPSYG
CCCCEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
SSRMQIDTEKIISLKPDAVLAASSEVGEFKQVQSAGIPVLQDLDYLESTPLARAEWMKAY
CCCEEECHHHHEEECCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
GILLNKEGAATKSFDSIAERYAEVAKKAKNAADKPSVLVGQETKGQWYVPGADSYMIKFM
CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCCEEEEEE
TDAGASDVMAQAVKGNGATPTDAEVVFKYGSKADFWLNGNYMSMTTWHGKDDALKQNPRY
ECCCHHHHHHHHHCCCCCCCCCHHEEEEECCCCEEEECCCEEEEEEECCCCCHHHCCCCC
ANLSAFQHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLADLTYIFHPDLMKGYTPYYYTK
CCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHEEHHHHHHCCHHHHCCCCCEEEE
LS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]