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The map label for this gene is farR [C]

Identifier: 50365334

GI number: 50365334

Start: 609611

End: 610309

Strand: Reverse

Name: farR [C]

Synonym: Mfl517

Alternate gene names: 50365334

Gene position: 610309-609611 (Counterclockwise)

Preceding gene: 50365335

Following gene: 50365333

Centisome position: 76.94

GC content: 24.03

Gene sequence:

>699_bases
ATGAATAAAAAATGAGAGATAGTATTTGATTATTTGATGCATCTAATTAGAGAGAATAAGGTTCAGCCAGGTGAAATATT
ACCTAGTCAAAATATGCTTAAAACAAAATTTAAGTATAGTGAACAACCAATAAGAATAGCATTCAATAAACTAATAGAAT
TACAAATTGTTAAGCCAGTTAATGGTAAAGGATATGTAGTTCAAGAAAAAATAAAAAATAACTTATTATTTAGTTTTAGA
GAATTATTCCCTAATTCAATAAATAAATATTACGAACTTAAAGAAATTAAAGTAGATGAATCACTATCAAAAAAAACAAA
TTTTTATATAGGAACTGACGTTTACTTTTTTAAATGTGTAAGAAAAGACAAAGATACAAATGAGGTTATTTTATATCAAG
AGAGTTTTGTACCTAAATCAATTTATAAAAATTTGACATTAAATTATTTAAATGAAAATGGTTTAATGAAATTTGTTGAG
TCTGAAACACCTTCTAAAGTTAGTCACTCTTCAAAAAAAATATATTTTGAAGATACAAGAGATAACGAACTACTTCGCAT
TTTTAATGATGATAGTTTGAATGGTTTTATTGTTGATGAGGGGAATGTTTATGGAATTTTTGGAGAACTACTTGAATATA
GATTAAGTAGGTATAAGCCTAAATTTTTCAAATGAGATTTTATAGAGTGAAGAAAATAA

Upstream 100 bases:

>100_bases
AGTTAAATCAATTTTTATTCTATTTGAATATTTGATTAAAAATATAGAATTTACTTTTTCAAAAAAAGTATAATTAATTT
TATTAAATGAGGAAAAATAA

Downstream 100 bases:

>100_bases
AAATATAAAAGAGGAAAAAATGAAAAAGAAAGATTATGCGTTTGAAGCCAAGCGTTTTATCAAAGCAGTTGGAGGTAAGT
CAAACATTGAGTCTTACCTT

Product: putative sucrose repressor

Products: NA

Alternate protein names: Sucrose Repressor

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNKKWEIVFDYLMHLIRENKVQPGEILPSQNMLKTKFKYSEQPIRIAFNKLIELQIVKPVNGKGYVVQEKIKNNLLFSFR
ELFPNSINKYYELKEIKVDESLSKKTNFYIGTDVYFFKCVRKDKDTNEVILYQESFVPKSIYKNLTLNYLNENGLMKFVE
SETPSKVSHSSKKIYFEDTRDNELLRIFNDDSLNGFIVDEGNVYGIFGELLEYRLSRYKPKFFKWDFIEWRK

Sequences:

>Translated_232_residues
MNKK*EIVFDYLMHLIRENKVQPGEILPSQNMLKTKFKYSEQPIRIAFNKLIELQIVKPVNGKGYVVQEKIKNNLLFSFR
ELFPNSINKYYELKEIKVDESLSKKTNFYIGTDVYFFKCVRKDKDTNEVILYQESFVPKSIYKNLTLNYLNENGLMKFVE
SETPSKVSHSSKKIYFEDTRDNELLRIFNDDSLNGFIVDEGNVYGIFGELLEYRLSRYKPKFFK*DFIE*RK
>Mature_232_residues
MNKK*EIVFDYLMHLIRENKVQPGEILPSQNMLKTKFKYSEQPIRIAFNKLIELQIVKPVNGKGYVVQEKIKNNLLFSFR
ELFPNSINKYYELKEIKVDESLSKKTNFYIGTDVYFFKCVRKDKDTNEVILYQESFVPKSIYKNLTLNYLNENGLMKFVE
SETPSKVSHSSKKIYFEDTRDNELLRIFNDDSLNGFIVDEGNVYGIFGELLEYRLSRYKPKFFK*DFIE*RK

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27226; Mature: 27226

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKEIVFDYLMHLIRENKVQPGEILPSQNMLKTKFKYSEQPIRIAFNKLIELQIVKPVN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEEEECCCC
GKGYVVQEKIKNNLLFSFRELFPNSINKYYELKEIKVDESLSKKTNFYIGTDVYFFKCVR
CCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCHHHHCCCEEECCHHHHHHHHH
KDKDTNEVILYQESFVPKSIYKNLTLNYLNENGLMKFVESETPSKVSHSSKKIYFEDTRD
CCCCCCEEEEEECCCCCHHHHHCCEEEEECCCCCEEECCCCCCCHHCCCCCEEEEECCCC
NELLRIFNDDSLNGFIVDEGNVYGIFGELLEYRLSRYKPKFFKDFIERK
CCEEEEECCCCCCEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MNKKEIVFDYLMHLIRENKVQPGEILPSQNMLKTKFKYSEQPIRIAFNKLIELQIVKPVN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEEEECCCC
GKGYVVQEKIKNNLLFSFRELFPNSINKYYELKEIKVDESLSKKTNFYIGTDVYFFKCVR
CCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCHHHHCCCEEECCHHHHHHHHH
KDKDTNEVILYQESFVPKSIYKNLTLNYLNENGLMKFVESETPSKVSHSSKKIYFEDTRD
CCCCCCEEEEEECCCCCHHHHHCCEEEEECCCCCEEECCCCCCCHHCCCCCEEEEECCCC
NELLRIFNDDSLNGFIVDEGNVYGIFGELLEYRLSRYKPKFFKDFIERK
CCEEEEECCCCCCEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA