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The map label for this gene is yhfR [C]

Identifier: 50365132

GI number: 50365132

Start: 369534

End: 370232

Strand: Direct

Name: yhfR [C]

Synonym: Mfl316

Alternate gene names: 50365132

Gene position: 369534-370232 (Clockwise)

Preceding gene: 50365131

Following gene: 50365133

Centisome position: 46.59

GC content: 20.89

Gene sequence:

>699_bases
ATGATATTAGAAATGAGGTTTTTTCAAATGGATCATGGTTATATATATTCTTACATTGAAAATAAAATACTAAGTAATGA
ATTTAGTGCAGACCAAAAAATGCTTTCAGAAAATCAAATATGCATAAAATTTAATGTTTCAAGAACTTTAGCTAGAGATG
TTTACAAGGAATTAGTAGTTGATGGTTATCTGTATAGTATTCATGGTAAGGGGTATTTTGTAAATGACAAAAAATACTGA
ATGAAAAATATAGGATTAGATAAAAAGTATCCTCATTCAGAATATAAAAATGAAATTCTTGACTTCAAAATTGAATTACC
TAATTGATTTGTTGAAAATTATAAATTAAATAAAAATGATTATAATTGTTTTACAAAAGCAAGATATTTAAATAATAAAC
AAAGACATTTATCATATGTTTTTTTGAATAATAAACTAATTTTAAATATGGATCTTAAAGAAATAAAAAAATCAGTTGTT
AATTATCTAAAAAAAGATTTTGAATTTAAAAAATCATATAATTTTATCAAAATAGAAAAAGCTACAAAATTTGATGCTGA
TTTTTTTAGTATTAATGAAAATGATTTTATTGTTTGTCAATATTCCGTAATTTATCATAATGATGAAATAGTATTGCAAT
GCTCATTAGATAAAAGACCAATTGAATATTTAAATTTTGGATACATAGCAAACGTTTAA

Upstream 100 bases:

>100_bases
GTAAGAGAAATAATGAGAAAAAATAAAAAGTAAATAAACACCAAATGGTGTTTTTTATTTTAACTTTAAAGGAATTCAAT
TTAATCATAAAATAAGTATA

Downstream 100 bases:

>100_bases
AATCTTGTTACTACAAGTTACACTCACTAAAACCAATTTTATAATAATAATGTGAGGTGACAAAAATGTCTATAAGAGAT
AATATAACAAAAAAACAATA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MILEMRFFQMDHGYIYSYIENKILSNEFSADQKMLSENQICIKFNVSRTLARDVYKELVVDGYLYSIHGKGYFVNDKKYW
MKNIGLDKKYPHSEYKNEILDFKIELPNWFVENYKLNKNDYNCFTKARYLNNKQRHLSYVFLNNKLILNMDLKEIKKSVV
NYLKKDFEFKKSYNFIKIEKATKFDADFFSINENDFIVCQYSVIYHNDEIVLQCSLDKRPIEYLNFGYIANV

Sequences:

>Translated_232_residues
MILEMRFFQMDHGYIYSYIENKILSNEFSADQKMLSENQICIKFNVSRTLARDVYKELVVDGYLYSIHGKGYFVNDKKY*
MKNIGLDKKYPHSEYKNEILDFKIELPN*FVENYKLNKNDYNCFTKARYLNNKQRHLSYVFLNNKLILNMDLKEIKKSVV
NYLKKDFEFKKSYNFIKIEKATKFDADFFSINENDFIVCQYSVIYHNDEIVLQCSLDKRPIEYLNFGYIANV
>Mature_232_residues
MILEMRFFQMDHGYIYSYIENKILSNEFSADQKMLSENQICIKFNVSRTLARDVYKELVVDGYLYSIHGKGYFVNDKKY*
MKNIGLDKKYPHSEYKNEILDFKIELPN*FVENYKLNKNDYNCFTKARYLNNKQRHLSYVFLNNKLILNMDLKEIKKSVV
NYLKKDFEFKKSYNFIKIEKATKFDADFFSINENDFIVCQYSVIYHNDEIVLQCSLDKRPIEYLNFGYIANV

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27640; Mature: 27640

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEMRFFQMDHGYIYSYIENKILSNEFSADQKMLSENQICIKFNVSRTLARDVYKELVV
CEEEEEEEEECCCEEHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
DGYLYSIHGKGYFVNDKKYMKNIGLDKKYPHSEYKNEILDFKIELPNFVENYKLNKNDYN
CCEEEEEECCEEEECCHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCHHHCCCCCCCCCC
CFTKARYLNNKQRHLSYVFLNNKLILNMDLKEIKKSVVNYLKKDFEFKKSYNFIKIEKAT
HHHHHHHHCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHCCHHHHCCCEEEEECCC
KFDADFFSINENDFIVCQYSVIYHNDEIVLQCSLDKRPIEYLNFGYIANV
CCCCCEEEECCCCEEEEEEEEEEECCEEEEEECCCCCCHHHCCCCEEECC
>Mature Secondary Structure
MILEMRFFQMDHGYIYSYIENKILSNEFSADQKMLSENQICIKFNVSRTLARDVYKELVV
CEEEEEEEEECCCEEHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH
DGYLYSIHGKGYFVNDKKYMKNIGLDKKYPHSEYKNEILDFKIELPNFVENYKLNKNDYN
CCEEEEEECCEEEECCHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCHHHCCCCCCCCCC
CFTKARYLNNKQRHLSYVFLNNKLILNMDLKEIKKSVVNYLKKDFEFKKSYNFIKIEKAT
HHHHHHHHCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHCCHHHHCCCEEEEECCC
KFDADFFSINENDFIVCQYSVIYHNDEIVLQCSLDKRPIEYLNFGYIANV
CCCCCEEEECCCCEEEEEEEEEEECCEEEEEECCCCCCHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA