Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is sau3AIR [H]
Identifier: 50365123
GI number: 50365123
Start: 353411
End: 354769
Strand: Reverse
Name: sau3AIR [H]
Synonym: Mfl307
Alternate gene names: 50365123
Gene position: 354769-353411 (Counterclockwise)
Preceding gene: 50365135
Following gene: 50365063
Centisome position: 44.72
GC content: 22.96
Gene sequence:
>1359_bases ATGAATAAGACAATAGATGATATATTTCGTAGAGCAAAAGAAGCGGAAAATAAACAATTAGGAGAAATAATTAATTTTGA TGAAATTGATTATAAACTTAAAGATAAAGGAAGAATAGGAAATTTAATTCAAAAGTATTATTTCAATATTGACATAAATA ACAGATCTGAAAGCGATTTTAAAGAGTTAGGTTTAGATTTAGAATTAAAAGTTACTGGTTTAAAACAAAACAAGAAAAAA CAGTGAATTGCAAAAGAAAGAGTTTCTCTTTCAATGATTGATTTTAATAATATAGAAAAAGATTTTACTGATTCAAAGGT TCTTAATAAAAATAAAAATATACTTTTAATAGGTCACGAATACAACAAGGACAAAAATCGTAAAAATTTAAAAATCATAA AATCTATACTATGAAAGTATGAAAATATTTCTGAAAATGAAAAAAAAATTATTGAAAATGATTACTCAATAATTTATCAA AAAATACAAAATGGAATTGCTCATGAGCTTTCTTGTTCAGACACTAAAATTTTAGAAGCGACAACAAAGGGGCAAGGTAA AAATAAAGATTTAAGAAATCAACCAAATAGTGATTTTAAAGCAAAAAGTAGAGCTTTTGCTTTAAAAAAGTGATATGTAA ATTACATTTTAACAGGAAGTGATTTTGAAAGTATAAATGCTTATTTTAATACTTCTAGTTTAAAAGCTTATAACTTTTTA AAGAATTTTATAAACGCAGATTTATCTGATTATGCTAAAAAAAATAATATCAATACTTCTGCAAAACAAGCAAACGGAAT AATTCTAAAAAAGATGTTAGAAGAATATGATGATTCAATTTTAGAACTAATTAGTGAAGATCAAATAAAAGTAAGAACCA TGAGACTAAGTAAATCTGGTGAAATAACACAGGAAAGTATGCCAATTTCGTCTCATCACATTAAAATTGATGAAATATTA AAAGAAAACAAATTTGAGGATTCTTTATTTTATCAAGAGCTTACAAAACCATATATTATAGTTACAATAGATGAAAATAT TTTTAGTAAAAAAATCATTAAAGATGTCGTTCTGCTTGATGGTATTATTTCAAAAAAAGATATTAATGAAAGAATTTATA AAAATGCAGAGAACATTTGAAAGCAAACAAAACTTTCTTTTGAAACAATAAATAAAGGTAAAAAAGAAGATTTTATTCTA ACTAAACAAAAAGAAGACAAAGATTTTCATTTAAGACCTAAAGCAAAAAATTCAAATGCCAAAAATAAATATGAAAATTC TAATTTAACATTTCAAGCATTTTGATTAAATCGCAAAACAATTTCATTTTTAATCAAAAAACATAGAGGCCTTATTTAA
Upstream 100 bases:
>100_bases ACGACTTTGATTTTATCAGACATTATTTCACACTCTTTCATAAAATATTTTATAATAACATTAATAAATTATACACTAAA ATAGGAAGAGAAAATATAAT
Downstream 100 bases:
>100_bases AAAGACATCTATGTTTTTTTACTCTGTTAACAATGTTAATATTTTAGTTGCTACTAAATCAACTGCAACTTCATTCCCCT CTTTATAAGGAATTATTAAA
Product: type II restriction enzyme Sau3AI, GATC site
Products: NA
Alternate protein names: R.Sau3AI; Endonuclease Sau3AI; Type II restriction enzyme Sau3AI [H]
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNKTIDDIFRRAKEAENKQLGEIINFDEIDYKLKDKGRIGNLIQKYYFNIDINNRSESDFKELGLDLELKVTGLKQNKKK QWIAKERVSLSMIDFNNIEKDFTDSKVLNKNKNILLIGHEYNKDKNRKNLKIIKSILWKYENISENEKKIIENDYSIIYQ KIQNGIAHELSCSDTKILEATTKGQGKNKDLRNQPNSDFKAKSRAFALKKWYVNYILTGSDFESINAYFNTSSLKAYNFL KNFINADLSDYAKKNNINTSAKQANGIILKKMLEEYDDSILELISEDQIKVRTMRLSKSGEITQESMPISSHHIKIDEIL KENKFEDSLFYQELTKPYIIVTIDENIFSKKIIKDVVLLDGIISKKDINERIYKNAENIWKQTKLSFETINKGKKEDFIL TKQKEDKDFHLRPKAKNSNAKNKYENSNLTFQAFWLNRKTISFLIKKHRGLI
Sequences:
>Translated_452_residues MNKTIDDIFRRAKEAENKQLGEIINFDEIDYKLKDKGRIGNLIQKYYFNIDINNRSESDFKELGLDLELKVTGLKQNKKK Q*IAKERVSLSMIDFNNIEKDFTDSKVLNKNKNILLIGHEYNKDKNRKNLKIIKSIL*KYENISENEKKIIENDYSIIYQ KIQNGIAHELSCSDTKILEATTKGQGKNKDLRNQPNSDFKAKSRAFALKK*YVNYILTGSDFESINAYFNTSSLKAYNFL KNFINADLSDYAKKNNINTSAKQANGIILKKMLEEYDDSILELISEDQIKVRTMRLSKSGEITQESMPISSHHIKIDEIL KENKFEDSLFYQELTKPYIIVTIDENIFSKKIIKDVVLLDGIISKKDINERIYKNAENI*KQTKLSFETINKGKKEDFIL TKQKEDKDFHLRPKAKNSNAKNKYENSNLTFQAF*LNRKTISFLIKKHRGLI >Mature_452_residues MNKTIDDIFRRAKEAENKQLGEIINFDEIDYKLKDKGRIGNLIQKYYFNIDINNRSESDFKELGLDLELKVTGLKQNKKK Q*IAKERVSLSMIDFNNIEKDFTDSKVLNKNKNILLIGHEYNKDKNRKNLKIIKSIL*KYENISENEKKIIENDYSIIYQ KIQNGIAHELSCSDTKILEATTKGQGKNKDLRNQPNSDFKAKSRAFALKK*YVNYILTGSDFESINAYFNTSSLKAYNFL KNFINADLSDYAKKNNINTSAKQANGIILKKMLEEYDDSILELISEDQIKVRTMRLSKSGEITQESMPISSHHIKIDEIL KENKFEDSLFYQELTKPYIIVTIDENIFSKKIIKDVVLLDGIISKKDINERIYKNAENI*KQTKLSFETINKGKKEDFIL TKQKEDKDFHLRPKAKNSNAKNKYENSNLTFQAF*LNRKTISFLIKKHRGLI
Specific function: Recognizes the double-stranded sequence GATC and cleaves before G-1 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011337 - InterPro: IPR011335 [H]
Pfam domain/function: PF02976 MutH [H]
EC number: =3.1.21.4 [H]
Molecular weight: Translated: 51980; Mature: 51980
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTIDDIFRRAKEAENKQLGEIINFDEIDYKLKDKGRIGNLIQKYYFNIDINNRSESDF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHEEEEEECCCCCCHH KELGLDLELKVTGLKQNKKKQIAKERVSLSMIDFNNIEKDFTDSKVLNKNKNILLIGHEY HHCCCCEEEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCC NKDKNRKNLKIIKSILKYENISENEKKIIENDYSIIYQKIQNGIAHELSCSDTKILEATT CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCEEEEEEC KGQGKNKDLRNQPNSDFKAKSRAFALKKYVNYILTGSDFESINAYFNTSSLKAYNFLKNF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHEECCCHHHHHHHHHHH INADLSDYAKKNNINTSAKQANGIILKKMLEEYDDSILELISEDQIKVRTMRLSKSGEIT HCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC QESMPISSHHIKIDEILKENKFEDSLFYQELTKPYIIVTIDENIFSKKIIKDVVLLDGII HHCCCCCCCCEEHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH SKKDINERIYKNAENIKQTKLSFETINKGKKEDFILTKQKEDKDFHLRPKAKNSNAKNKY HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCC ENSNLTFQAFLNRKTISFLIKKHRGLI CCCCEEEEEHHCHHHHHHHHHHHCCCC >Mature Secondary Structure MNKTIDDIFRRAKEAENKQLGEIINFDEIDYKLKDKGRIGNLIQKYYFNIDINNRSESDF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHEEEEEECCCCCCHH KELGLDLELKVTGLKQNKKKQIAKERVSLSMIDFNNIEKDFTDSKVLNKNKNILLIGHEY HHCCCCEEEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCCCCCEEEEECCC NKDKNRKNLKIIKSILKYENISENEKKIIENDYSIIYQKIQNGIAHELSCSDTKILEATT CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCEEEEEEC KGQGKNKDLRNQPNSDFKAKSRAFALKKYVNYILTGSDFESINAYFNTSSLKAYNFLKNF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHEECCCHHHHHHHHHHH INADLSDYAKKNNINTSAKQANGIILKKMLEEYDDSILELISEDQIKVRTMRLSKSGEIT HCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC QESMPISSHHIKIDEILKENKFEDSLFYQELTKPYIIVTIDENIFSKKIIKDVVLLDGII HHCCCCCCCCEEHHHHHHHCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH SKKDINERIYKNAENIKQTKLSFETINKGKKEDFILTKQKEDKDFHLRPKAKNSNAKNKY HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCC ENSNLTFQAFLNRKTISFLIKKHRGLI CCCCEEEEEHHCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2227451 [H]