Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is yccK [H]
Identifier: 50365068
GI number: 50365068
Start: 281158
End: 282144
Strand: Direct
Name: yccK [H]
Synonym: Mfl252
Alternate gene names: 50365068
Gene position: 281158-282144 (Clockwise)
Preceding gene: 50365067
Following gene: 50365069
Centisome position: 35.44
GC content: 29.69
Gene sequence:
>987_bases ATGAAAACAAGAACATTAGGAAAAGATTTAATTGTTTCAGAAATGGGATTAGGTTGTATGGGTTTAAGTTACAGTCAACC TCCATTTCCAACAAAAGAAGAAGCAATTAAATTTTTAAGAGAAGCATATGAACAAGGTGTAACATTTTTTGATACAGCTG AAGTTTATGGTCCTTTTGATAATGAAGAATTATTAGGAGAAGCTTTCAAAGACATACGTGATAAAGTAGTTATTGCAACA AAATTTGGTTTTTCATTTGATGGAAAAAATATAACTGGAGTTGATAGTAGCAGAGAAAATATAATGAGAGCTATTGAGGG TTCATTAAATAGATTGCAAACTGATTACATTGACTTATATTATCAACATAGAGTTGATCCAAACACTTCAATTGAAGAAG TTGCACAAGTGATGAAAGAATTAATGGAACAAGGAAAAATTAAACATTGAGGATTAAGTGAAGCTTCTGCTAAAACTATT AGAAAAGCACATGCAATTTGTCCAGTTACAGCATTACAAAGTGAATACTCAATGTTTTGAAGAGAAGCTGAAACAAAAGT TATGCCTACTTTAGAAGAATTGGGAATTGGTTTTGTACCATTTTCTCCGTTAGGAAGAGGATTCTTAACAGGAACAATTA AACCAGGTCATATTTTTCCAGAAGGTGATTTTAGAAATTCTATCCCAAGATTTAATACACCAGAGTATCTAGAAAATAAT TTTAAATTAGTTAAATATGTTGAAGAACTAGCTGAACAAAAAAATACAACTCCAGCTGCTGTTGCTTTAGGTTGATTGTT AGCGCAAAAACCATGAATAGTTCCAATTCCAGGAACTAAAAAAATTGAAAGACTAAAAGAAAATAATTCAGGAACAAATG TAATGTTTTCAAAAGAAGAATTAGAAAATATTAAAAAAATGTTAGATACTATTGAATTAGTTGGTCATAGATATAATGAT GCTACTGAAAGTAGAGTAGATAAATAA
Upstream 100 bases:
>100_bases AAAAAGAAACTTTACGAAAATAATTAATTTTTTTGCTTGCATTAAAGTAGGTTTAATGAAATATGATGATATTGAGTTCA AAACTCAGAGGAGATAAAAT
Downstream 100 bases:
>100_bases TAAGATATTTAAAAACCGTGATATTCATTTCGGTTTTTTTACTTTATAATTATTAAATAAATATAATCTTATTATCAGAA AGGGAAAATATGACAAAATG
Product: putative aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKTRTLGKDLIVSEMGLGCMGLSYSQPPFPTKEEAIKFLREAYEQGVTFFDTAEVYGPFDNEELLGEAFKDIRDKVVIAT KFGFSFDGKNITGVDSSRENIMRAIEGSLNRLQTDYIDLYYQHRVDPNTSIEEVAQVMKELMEQGKIKHWGLSEASAKTI RKAHAICPVTALQSEYSMFWREAETKVMPTLEELGIGFVPFSPLGRGFLTGTIKPGHIFPEGDFRNSIPRFNTPEYLENN FKLVKYVEELAEQKNTTPAAVALGWLLAQKPWIVPIPGTKKIERLKENNSGTNVMFSKEELENIKKMLDTIELVGHRYND ATESRVDK
Sequences:
>Translated_328_residues MKTRTLGKDLIVSEMGLGCMGLSYSQPPFPTKEEAIKFLREAYEQGVTFFDTAEVYGPFDNEELLGEAFKDIRDKVVIAT KFGFSFDGKNITGVDSSRENIMRAIEGSLNRLQTDYIDLYYQHRVDPNTSIEEVAQVMKELMEQGKIKH*GLSEASAKTI RKAHAICPVTALQSEYSMF*REAETKVMPTLEELGIGFVPFSPLGRGFLTGTIKPGHIFPEGDFRNSIPRFNTPEYLENN FKLVKYVEELAEQKNTTPAAVALG*LLAQKP*IVPIPGTKKIERLKENNSGTNVMFSKEELENIKKMLDTIELVGHRYND ATESRVDK >Mature_328_residues MKTRTLGKDLIVSEMGLGCMGLSYSQPPFPTKEEAIKFLREAYEQGVTFFDTAEVYGPFDNEELLGEAFKDIRDKVVIAT KFGFSFDGKNITGVDSSRENIMRAIEGSLNRLQTDYIDLYYQHRVDPNTSIEEVAQVMKELMEQGKIKH*GLSEASAKTI RKAHAICPVTALQSEYSMF*REAETKVMPTLEELGIGFVPFSPLGRGFLTGTIKPGHIFPEGDFRNSIPRFNTPEYLENN FKLVKYVEELAEQKNTTPAAVALG*LLAQKP*IVPIPGTKKIERLKENNSGTNVMFSKEELENIKKMLDTIELVGHRYND ATESRVDK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=232, Percent_Identity=36.2068965517241, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436962, Length=232, Percent_Identity=35.7758620689655, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI27436966, Length=232, Percent_Identity=35.7758620689655, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI27436969, Length=227, Percent_Identity=34.8017621145374, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4504825, Length=224, Percent_Identity=34.8214285714286, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27436971, Length=221, Percent_Identity=35.2941176470588, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI223718702, Length=287, Percent_Identity=26.4808362369338, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI41327764, Length=281, Percent_Identity=27.7580071174377, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI41152114, Length=188, Percent_Identity=31.3829787234043, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=31.5625, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1789375, Length=314, Percent_Identity=29.9363057324841, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788070, Length=332, Percent_Identity=29.8192771084337, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787674, Length=312, Percent_Identity=28.8461538461538, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788081, Length=275, Percent_Identity=25.8181818181818, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI48994888, Length=284, Percent_Identity=26.7605633802817, Blast_Score=79, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325384, Length=347, Percent_Identity=29.3948126801153, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323998, Length=292, Percent_Identity=27.7397260273973, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=27.0547945205479, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325169, Length=325, Percent_Identity=25.5384615384615, Blast_Score=96, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6322615, Length=254, Percent_Identity=25.9842519685039, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319951, Length=274, Percent_Identity=27.007299270073, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321052, Length=124, Percent_Identity=34.6774193548387, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640980, Length=239, Percent_Identity=29.7071129707113, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI45549126, Length=235, Percent_Identity=30.2127659574468, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24646159, Length=220, Percent_Identity=28.6363636363636, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36363; Mature: 36363
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRTLGKDLIVSEMGLGCMGLSYSQPPFPTKEEAIKFLREAYEQGVTFFDTAEVYGPFD CCCCCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCC NEELLGEAFKDIRDKVVIATKFGFSFDGKNITGVDSSRENIMRAIEGSLNRLQTDYIDLY CHHHHHHHHHHHHHCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YQHRVDPNTSIEEVAQVMKELMEQGKIKHGLSEASAKTIRKAHAICPVTALQSEYSMFRE HHHCCCCCCCHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH AETKVMPTLEELGIGFVPFSPLGRGFLTGTIKPGHIFPEGDFRNSIPRFNTPEYLENNFK HHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHCCHH LVKYVEELAEQKNTTPAAVALGLLAQKPIVPIPGTKKIERLKENNSGTNVMFSKEELENI HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECHHHHHHH KKMLDTIELVGHRYNDATESRVDK HHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure MKTRTLGKDLIVSEMGLGCMGLSYSQPPFPTKEEAIKFLREAYEQGVTFFDTAEVYGPFD CCCCCCCHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCC NEELLGEAFKDIRDKVVIATKFGFSFDGKNITGVDSSRENIMRAIEGSLNRLQTDYIDLY CHHHHHHHHHHHHHCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YQHRVDPNTSIEEVAQVMKELMEQGKIKHGLSEASAKTIRKAHAICPVTALQSEYSMFRE HHHCCCCCCCHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH AETKVMPTLEELGIGFVPFSPLGRGFLTGTIKPGHIFPEGDFRNSIPRFNTPEYLENNFK HHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHCCHH LVKYVEELAEQKNTTPAAVALGLLAQKPIVPIPGTKKIERLKENNSGTNVMFSKEELENI HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECHHHHHHH KKMLDTIELVGHRYNDATESRVDK HHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]