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The map label for this gene is ycfF [C]

Identifier: 50365061

GI number: 50365061

Start: 272802

End: 273209

Strand: Reverse

Name: ycfF [C]

Synonym: Mfl245

Alternate gene names: 50365061

Gene position: 273209-272802 (Counterclockwise)

Preceding gene: 50365062

Following gene: 50365043

Centisome position: 34.44

GC content: 27.21

Gene sequence:

>408_bases
ATGAATGATTGTATATTTTGTAAAATAATAAAGCAAGAAATTCCTTCGTATAAAATTTATGAGAATGAATATGTTTATGC
ATTCTTAGATATTAATCCTGTTAGTGATGGACATGCATTGGTCATTCCAAAAGTACACGCTGAAAATTTATCAACAACAC
CTGATTTATATTTATCTGAAGTAAGCAAAGCAAAAAAAGTTGTTGCTCAAATACTTCAAGAAAAATTAAAAGGTGTCAAA
GGTTTTAACTATGTTTCTAATCAAGAAGCAATTGCTAAACAAGTGGTATTCCATTATCACGAACATATCTTACCTAAATT
TAAAGAAGATGAAGGTTTCTTACACGATAAGAACGTGAATCTTAAATATGCAACTTTAGAAGATGTTTTTAATGAAATAA
CAAAATAA

Upstream 100 bases:

>100_bases
ATACTAAATACATCATGGATGGTGATAATGTTCTATTCCAAGGATTATACGATGAACTTGCAAAATATATTAAAGACGAA
GACGGAAATACATCAGACTA

Downstream 100 bases:

>100_bases
AAGATGGCTTTAAAAGTCATCTTTTTTATTACTTTAATACCTAATAATTTGACATAAAAAAATGTAACCTAAGTTACATT
ACATTACTTTTTATGTTTAT

Product: putative nucleotidyl hydrolase/transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNDCIFCKIIKQEIPSYKIYENEYVYAFLDINPVSDGHALVIPKVHAENLSTTPDLYLSEVSKAKKVVAQILQEKLKGVK
GFNYVSNQEAIAKQVVFHYHEHILPKFKEDEGFLHDKNVNLKYATLEDVFNEITK

Sequences:

>Translated_135_residues
MNDCIFCKIIKQEIPSYKIYENEYVYAFLDINPVSDGHALVIPKVHAENLSTTPDLYLSEVSKAKKVVAQILQEKLKGVK
GFNYVSNQEAIAKQVVFHYHEHILPKFKEDEGFLHDKNVNLKYATLEDVFNEITK
>Mature_135_residues
MNDCIFCKIIKQEIPSYKIYENEYVYAFLDINPVSDGHALVIPKVHAENLSTTPDLYLSEVSKAKKVVAQILQEKLKGVK
GFNYVSNQEAIAKQVVFHYHEHILPKFKEDEGFLHDKNVNLKYATLEDVFNEITK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=103, Percent_Identity=35.9223300970874, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320078, Length=111, Percent_Identity=44.1441441441441, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15575; Mature: 15575

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDCIFCKIIKQEIPSYKIYENEYVYAFLDINPVSDGHALVIPKVHAENLSTTPDLYLSE
CCCCHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHH
VSKAKKVVAQILQEKLKGVKGFNYVSNQEAIAKQVVFHYHEHILPKFKEDEGFLHDKNVN
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC
LKYATLEDVFNEITK
EEEHHHHHHHHHHCC
>Mature Secondary Structure
MNDCIFCKIIKQEIPSYKIYENEYVYAFLDINPVSDGHALVIPKVHAENLSTTPDLYLSE
CCCCHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHH
VSKAKKVVAQILQEKLKGVKGFNYVSNQEAIAKQVVFHYHEHILPKFKEDEGFLHDKNVN
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC
LKYATLEDVFNEITK
EEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]