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The map label for this gene is yoaF [C]

Identifier: 50085142

GI number: 50085142

Start: 1997718

End: 1998152

Strand: Reverse

Name: yoaF [C]

Synonym: ACIAD2007

Alternate gene names: 50085142

Gene position: 1998152-1997718 (Counterclockwise)

Preceding gene: 50085143

Following gene: 50085141

Centisome position: 55.53

GC content: 35.17

Gene sequence:

>435_bases
ATGAAAAAAATCACATTACTTTCGATATTGCTATTACCTCTAGCAGCGTGTTCATCCATTCAGCACCAAGATGATTCAAA
ACTTAAAGTTGGTATGGCAAATCCTGCCAGCGAGTTTTGTATTCAACAGAAAGGAAAATTAAATATCAAAAATGAAGCAA
ATGGACAAGTTGGATACTGTACTTTGCCAAATGGGCAAGTTGTGGAAGAGTGGGAGTTTTTTCATTCACAACAAAAGATA
TGTGCACCTGATGAAGCTCAAAAGCTGATTGGTCAATCAGGTTTAACAAATGATCAAATTAAAAAATTAACCAAAGCAGA
ACTCATTCGTAATATTGCGCCAGGACAACCAGTGACTATGGATTATCGTGAAAATCGTATTACCATTACGACTGATCCAT
TATCTAAAAAAATTATAGATGCATCTTGTGGGTAA

Upstream 100 bases:

>100_bases
AAACTAATTTATGCTAGGACTCTCTTTAAACGGAGAGTCCTAGAAATAAATAGAAATTAGTAGTTAATAGAATCTATATC
ATTTAATAGGATATTAAAAT

Downstream 100 bases:

>100_bases
GAAGATTGACTTTAGAAAGTCTCTTAATGAAACTGTATTTTAAAAAAATCGTTTGATTAAGAGCTTTTTTATATGGGTGT
TTGAGAGGCTCAATCATTTT

Product: hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKITLLSILLLPLAACSSIQHQDDSKLKVGMANPASEFCIQQKGKLNIKNEANGQVGYCTLPNGQVVEEWEFFHSQQKI
CAPDEAQKLIGQSGLTNDQIKKLTKAELIRNIAPGQPVTMDYRENRITITTDPLSKKIIDASCG

Sequences:

>Translated_144_residues
MKKITLLSILLLPLAACSSIQHQDDSKLKVGMANPASEFCIQQKGKLNIKNEANGQVGYCTLPNGQVVEEWEFFHSQQKI
CAPDEAQKLIGQSGLTNDQIKKLTKAELIRNIAPGQPVTMDYRENRITITTDPLSKKIIDASCG
>Mature_144_residues
MKKITLLSILLLPLAACSSIQHQDDSKLKVGMANPASEFCIQQKGKLNIKNEANGQVGYCTLPNGQVVEEWEFFHSQQKI
CAPDEAQKLIGQSGLTNDQIKKLTKAELIRNIAPGQPVTMDYRENRITITTDPLSKKIIDASCG

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15869; Mature: 15869

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITLLSILLLPLAACSSIQHQDDSKLKVGMANPASEFCIQQKGKLNIKNEANGQVGYC
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCEEECCCCCCCEEEE
TLPNGQVVEEWEFFHSQQKICAPDEAQKLIGQSGLTNDQIKKLTKAELIRNIAPGQPVTM
ECCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
DYRENRITITTDPLSKKIIDASCG
EECCCEEEEEECCCCHHHHCCCCC
>Mature Secondary Structure
MKKITLLSILLLPLAACSSIQHQDDSKLKVGMANPASEFCIQQKGKLNIKNEANGQVGYC
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCEEECCCCCCCEEEE
TLPNGQVVEEWEFFHSQQKICAPDEAQKLIGQSGLTNDQIKKLTKAELIRNIAPGQPVTM
ECCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
DYRENRITITTDPLSKKIIDASCG
EECCCEEEEEECCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA