Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yqfA [C]
Identifier: 49188289
GI number: 49188289
Start: 5191807
End: 5192454
Strand: Reverse
Name: yqfA [C]
Synonym: BAS5305
Alternate gene names: 49188289
Gene position: 5192454-5191807 (Counterclockwise)
Preceding gene: 49188291
Following gene: 49188288
Centisome position: 99.31
GC content: 33.64
Gene sequence:
>648_bases ATGAATACTTACATAAGAGAACCGGTTAATGCTTTTACCCATTTGGGAGGAGCTGTATTATCATTTATTGCATTACTAGC TATGCTTGTAAAAGTTTCTATTAAGATGCCATCTTTTGCGGCAATTACAGCTATTATTTTGTTTGGTATCGGAATGATGG TTCTGTATACAGCATCAGCTGTATATCATAGTGTTGTAGCTAGTGAACGTGTTATTTATTTCTTTAGGAAGCTTGATCAC TCTATGATTTTTATATTGATTGCAGGTACATATGCACCATTTTGTTTAATTACATTACATTCCGCAAACGGTTTATTATT ATTTTGTTTAGTTTACGCAACTGCCATTTGTGGTATTGTTTTTAAAATGTTTTGGTTTAATTGTCCGAGATGGTTATCAA CAGCAATTTATATTACAATGGGCTGGTTAATTGTTCTGTTCTTTGCACCGTTAGCCGCTAACTTAAGTACAGGAGGTATG GTGCTCCTAGTACTTGGAGGCATTCTTTATACAATTGGTGGATTTATTTACGGAACAAAGCCAAAGTGGTTAGAGTTTAA ATATATGGGACATCATGAAATTTTTCACGTTTTCGTGTTATTGGGAAGCCTAGCTCACTTTTTAAGTGTATATTGCTATG TAATTTAA
Upstream 100 bases:
>100_bases TACGAAACAAATGAATTGTAAATGTTGACCTCAAATATTAATAAGTATATAATTACATATAGTTATCAAAACTACATGTA ATTATATGAGGGGTGTTTAT
Downstream 100 bases:
>100_bases CAATATAAAATTTCCGATTGATTTTTATTTTTCTTGATTAATAAAAAAAGATATAGACACATATGTATGTTGAAGAGTTG CATAACGTAAAGGTTATGTG
Product: hemolysin III family channel protein
Products: NA
Alternate protein names: Hemolysin III; Hly-III [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASAVYHSVVASERVIYFFRKLDH SMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGM VLLVLGGILYTIGGFIYGTKPKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI
Sequences:
>Translated_215_residues MNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASAVYHSVVASERVIYFFRKLDH SMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGM VLLVLGGILYTIGGFIYGTKPKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI >Mature_215_residues MNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASAVYHSVVASERVIYFFRKLDH SMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGM VLLVLGGILYTIGGFIYGTKPKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI
Specific function: Unknown
COG id: COG1272
COG function: function code R; Predicted membrane protein, hemolysin III homolog
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0073 (Hly-III) family [H]
Homologues:
Organism=Escherichia coli, GI1789266, Length=209, Percent_Identity=35.4066985645933, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004254 - InterPro: IPR005744 [H]
Pfam domain/function: PF03006 HlyIII [H]
EC number: NA
Molecular weight: Translated: 23954; Mature: 23954
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VYHSVVASERVIYFFRKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIV HHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH FKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGMVLLVLGGILYTIGGFIYGTK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC PKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VYHSVVASERVIYFFRKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIV HHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH FKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGMVLLVLGGILYTIGGFIYGTK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC PKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7495855 [H]