Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yerO [H]
Identifier: 49188273
GI number: 49188273
Start: 5171996
End: 5172868
Strand: Reverse
Name: yerO [H]
Synonym: BAS5288
Alternate gene names: 49188273
Gene position: 5172868-5171996 (Counterclockwise)
Preceding gene: 49188275
Following gene: 49188270
Centisome position: 98.93
GC content: 32.99
Gene sequence:
>873_bases ATGAAAGAAAAAGAGCGCTTAATTATAGAGATGGCTATGAAGTTATTTGCGACTAAGGGTGTAAATGCGACATCAGTGCA GGAAATTGTGACAGCTTGTGGCATATCTAAGGGAGCCTTTTATTTATACTTTAAATCGAAAGAGGAACTTTTATTAGCAA CACTCCGATATTACTATGACAAGATTCAAAACAAAATGATGGATATTGAAAAAGAGTCGTTATTGCCACGTGAAAAATTT GCAAAACAACTGCATTGCCAGTTTAACGATATACAAAAGCATAAAGAATTCATTATTATGCATGCCAGAGAAAATGCTAT TCCCTTTAATAAAGAAGTAGAAGAATTTATGATGCGGATGAAGTTAGAGTCTCACGCCTTTTATCGAAATAGTTTACTGT CTATTTATGGTGATAAGGTTATGCCATATTTATTAGATTTAGTCATTATGGTAGAAGGCATATGCCGTGGATATTTAGAA TTAATTATTTTACAAGCGCCAGAAATCGACTTATCTTACGTCTCTGCGTTTATTTTGAAAAGAGTAGACGATTTAGTAGA TGGATTGGTAAAATCTTCGGAAGAACCTGTGTTACATGAAGAAAAGCTTGGAGAATTTCTTTGTAAATCAGAGCTTATTA AGGAGCAGGTTAAGGAACACTTTTTAAAAGAAATTATTGTGTTTAAACGTACATTAGCTGATCAATTAGAAGATGAGGAA TTGCTTGTTACGTTAGATGTTTTAGAGGCAGAAATGAGGTTGCCAAATCCAAGGATTCCGGTTATACAAGGAATGCTGTC TAATTTAGAAGTATATCCAAATTTAAAAGAATTTCGTTTGAGACTTATGGGCTATTACAATATAAAAAGGTAA
Upstream 100 bases:
>100_bases CTAATACATAATATAACTGACTGATTGGTCAGCCGTCAATGAAAAGGAATGGTATAATGAATTCATAATAAGATGCGAGA TTAAATTTAGGAGAGACGAT
Downstream 100 bases:
>100_bases CAATGATAGTTTTCATTGTTACCTTTTTTATTATGCATTCACTTTTTCTTTTTTCAGTGCAGTCTCTTCTTGGTCAATGT TGATTGTTTCTTTTACGATA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEKESLLPREKF AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE LIILQAPEIDLSYVSAFILKRVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
Sequences:
>Translated_290_residues MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEKESLLPREKF AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE LIILQAPEIDLSYVSAFILKRVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR >Mature_290_residues MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYDKIQNKMMDIEKESLLPREKF AKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRMKLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLE LIILQAPEIDLSYVSAFILKRVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR015893 - InterPro: IPR001647 [H]
Pfam domain/function: PF00440 TetR_N [H]
EC number: NA
Molecular weight: Translated: 34077; Mature: 34077
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH KIQNKMMDIEKESLLPREKFAKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRM HHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH KLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLELIILQAPEIDLSYVSAFILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR HEEHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEKERLIIEMAMKLFATKGVNATSVQEIVTACGISKGAFYLYFKSKEELLLATLRYYYD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH KIQNKMMDIEKESLLPREKFAKQLHCQFNDIQKHKEFIIMHARENAIPFNKEVEEFMMRM HHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHH KLESHAFYRNSLLSIYGDKVMPYLLDLVIMVEGICRGYLELIILQAPEIDLSYVSAFILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RVDDLVDGLVKSSEEPVLHEEKLGEFLCKSELIKEQVKEHFLKEIIVFKRTLADQLEDEE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLVTLDVLEAEMRLPNPRIPVIQGMLSNLEVYPNLKEFRLRLMGYYNIKR HEEHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]