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The map label for this gene is hemAT [H]

Identifier: 49188261

GI number: 49188261

Start: 5159279

End: 5160580

Strand: Direct

Name: hemAT [H]

Synonym: BAS5276

Alternate gene names: 49188261

Gene position: 5159279-5160580 (Clockwise)

Preceding gene: 49188260

Following gene: 49188263

Centisome position: 98.67

GC content: 31.49

Gene sequence:

>1302_bases
ATGCTTGGGGTTTTTAAAAAACATACAAATAAAACAAACGCCAGTATACTTGAATTAAGTAAGGATCAACAAATCACTTT
TAACGTGCCTACTAATTCTGAACTAAAAGTGCAAATGGATATGCTACATATTTCAAAAGAAGATTTACAAATCGTAAAGG
TACTACAGCCCTTTATTTATGAAGAAATTGATTGGATTACAGAAAAATTCTATGCCAATATTACAAAACAGCCTAATTTA
ATTACCATTATTGAACGTTATAGCTCTATTCCAAAGCTAAAGCAAACTTTAAAAACACATATAAAAGAATTATTCAGCGG
AGATATGCATGAAGATTTCATTGAGCAACGTGTTAAAATTGCAAAAAGACATGTACAAATTGGGTTACATAGAAAATGGT
ATACAGCTGCTTATCAAGAATTATTCCGCTCTATTATGAAGATTTTAAAAACAAAAATTACAACAATTGATGATTTTTCT
TACTCTATAAACGTAATAAATAAATTATTTACACTTGAACAAGAACTTGTTATTGCGGCCTATGAATCTAAATATGAAAG
AATGCAAAAAGAACTTGAAAAAGAAAAAGAAATAACATCTATGACCATTACGCATATTGCAACAGAATTAGCATCTGTAT
CTGAAAAAACGAGCGCTTCTATTCAACAATTAACCGCTAAATCTGAAACTATTGTAGAAATTGCCAAAACAGGTACATCA
TTAGCTACAACATCGGAAGAAAAAGCAAATAAAGGTAAAGAACAATTAAATCAGCAAAATAAACGAATGGAATACATTCA
AGCAAACATGGAAACGATTATTACTGATACTCATGAACTTCTCGATATTTCTAACAAAATTAATGAAATTATAGATATTG
TAAAATCAATTGCAGAGCAAACAAATTTGCTCGCACTAAATGCTGCTATTGAATCTGCACGTGCTGGGGAATTTGGTAAA
GGCTTCTCCGTTGTAGCTGGAGAAATTCGAAAGTTATCGGAGCAGACGAAAGAATCTATATTCAACGTTACAAAGCTCGT
TGAAAAAACAAATGAACAAATTATTCGTGTCTCTTCTTCAGTGAAACAAATTAGCTCCCTCGTATCTGAAGGAACAGATA
GTATGTCTGCAACAGATCAATACTTCCAAGAAATTGTAAAAGACATGTCTAACTCGAAAGAACAGAATAAAAAAATCGAA
AATGAATTAGAGACCATTTCACAAGTAATGAAAGGAATCCAAGACGATTCCTCAAAAATGGCTCTAACAGCCGATAGTTT
ACAACTGGAACTCAACCGATAG

Upstream 100 bases:

>100_bases
ATACTATTCTACACACTAATGTAGAGTAATTGTATATAAAAATATATAATTATATTAGAAACAAAAAATGAAAACGCTTC
ACATACAGGGGGGAAGAACG

Downstream 100 bases:

>100_bases
ATTGAAGCTCATGTCAGTACATATTCTTTATCTCCGCTGCCTCTTAGTCTTCATCTTCCATTCAAAAAAAAAGAATCCAA
TTTGGATTCTTTTTATTTTC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MLGVFKKHTNKTNASILELSKDQQITFNVPTNSELKVQMDMLHISKEDLQIVKVLQPFIYEEIDWITEKFYANITKQPNL
ITIIERYSSIPKLKQTLKTHIKELFSGDMHEDFIEQRVKIAKRHVQIGLHRKWYTAAYQELFRSIMKILKTKITTIDDFS
YSINVINKLFTLEQELVIAAYESKYERMQKELEKEKEITSMTITHIATELASVSEKTSASIQQLTAKSETIVEIAKTGTS
LATTSEEKANKGKEQLNQQNKRMEYIQANMETIITDTHELLDISNKINEIIDIVKSIAEQTNLLALNAAIESARAGEFGK
GFSVVAGEIRKLSEQTKESIFNVTKLVEKTNEQIIRVSSSVKQISSLVSEGTDSMSATDQYFQEIVKDMSNSKEQNKKIE
NELETISQVMKGIQDDSSKMALTADSLQLELNR

Sequences:

>Translated_433_residues
MLGVFKKHTNKTNASILELSKDQQITFNVPTNSELKVQMDMLHISKEDLQIVKVLQPFIYEEIDWITEKFYANITKQPNL
ITIIERYSSIPKLKQTLKTHIKELFSGDMHEDFIEQRVKIAKRHVQIGLHRKWYTAAYQELFRSIMKILKTKITTIDDFS
YSINVINKLFTLEQELVIAAYESKYERMQKELEKEKEITSMTITHIATELASVSEKTSASIQQLTAKSETIVEIAKTGTS
LATTSEEKANKGKEQLNQQNKRMEYIQANMETIITDTHELLDISNKINEIIDIVKSIAEQTNLLALNAAIESARAGEFGK
GFSVVAGEIRKLSEQTKESIFNVTKLVEKTNEQIIRVSSSVKQISSLVSEGTDSMSATDQYFQEIVKDMSNSKEQNKKIE
NELETISQVMKGIQDDSSKMALTADSLQLELNR
>Mature_433_residues
MLGVFKKHTNKTNASILELSKDQQITFNVPTNSELKVQMDMLHISKEDLQIVKVLQPFIYEEIDWITEKFYANITKQPNL
ITIIERYSSIPKLKQTLKTHIKELFSGDMHEDFIEQRVKIAKRHVQIGLHRKWYTAAYQELFRSIMKILKTKITTIDDFS
YSINVINKLFTLEQELVIAAYESKYERMQKELEKEKEITSMTITHIATELASVSEKTSASIQQLTAKSETIVEIAKTGTS
LATTSEEKANKGKEQLNQQNKRMEYIQANMETIITDTHELLDISNKINEIIDIVKSIAEQTNLLALNAAIESARAGEFGK
GFSVVAGEIRKLSEQTKESIFNVTKLVEKTNEQIIRVSSSVKQISSLVSEGTDSMSATDQYFQEIVKDMSNSKEQNKKIE
NELETISQVMKGIQDDSSKMALTADSLQLELNR

Specific function: Heme-containing signal transducer responsible for aerotaxis, the migratory response toward or away from oxygen [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=208, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788194, Length=203, Percent_Identity=32.0197044334975, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI2367378, Length=186, Percent_Identity=33.8709677419355, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787690, Length=210, Percent_Identity=32.8571428571429, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1789453, Length=204, Percent_Identity=26.4705882352941, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR012292
- InterPro:   IPR009050 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 49392; Mature: 49392

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVFKKHTNKTNASILELSKDQQITFNVPTNSELKVQMDMLHISKEDLQIVKVLQPFIY
CCCCCCCCCCCCCCHHHEECCCCEEEEECCCCCCEEEEHHHHHHCHHHHHHHHHHHHHHH
EEIDWITEKFYANITKQPNLITIIERYSSIPKLKQTLKTHIKELFSGDMHEDFIEQRVKI
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AKRHVQIGLHRKWYTAAYQELFRSIMKILKTKITTIDDFSYSINVINKLFTLEQELVIAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YESKYERMQKELEKEKEITSMTITHIATELASVSEKTSASIQQLTAKSETIVEIAKTGTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LATTSEEKANKGKEQLNQQNKRMEYIQANMETIITDTHELLDISNKINEIIDIVKSIAEQ
HHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLLALNAAIESARAGEFGKGFSVVAGEIRKLSEQTKESIFNVTKLVEKTNEQIIRVSSS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKQISSLVSEGTDSMSATDQYFQEIVKDMSNSKEQNKKIENELETISQVMKGIQDDSSKM
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ALTADSLQLELNR
EEEECCCEEEECC
>Mature Secondary Structure
MLGVFKKHTNKTNASILELSKDQQITFNVPTNSELKVQMDMLHISKEDLQIVKVLQPFIY
CCCCCCCCCCCCCCHHHEECCCCEEEEECCCCCCEEEEHHHHHHCHHHHHHHHHHHHHHH
EEIDWITEKFYANITKQPNLITIIERYSSIPKLKQTLKTHIKELFSGDMHEDFIEQRVKI
HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AKRHVQIGLHRKWYTAAYQELFRSIMKILKTKITTIDDFSYSINVINKLFTLEQELVIAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YESKYERMQKELEKEKEITSMTITHIATELASVSEKTSASIQQLTAKSETIVEIAKTGTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LATTSEEKANKGKEQLNQQNKRMEYIQANMETIITDTHELLDISNKINEIIDIVKSIAEQ
HHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLLALNAAIESARAGEFGKGFSVVAGEIRKLSEQTKESIFNVTKLVEKTNEQIIRVSSS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKQISSLVSEGTDSMSATDQYFQEIVKDMSNSKEQNKKIENELETISQVMKGIQDDSSKM
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ALTADSLQLELNR
EEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 10676961; 11821422 [H]