Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ypjH [H]
Identifier: 49188258
GI number: 49188258
Start: 5155664
End: 5156764
Strand: Reverse
Name: ypjH [H]
Synonym: BAS5273
Alternate gene names: 49188258
Gene position: 5156764-5155664 (Counterclockwise)
Preceding gene: 49188259
Following gene: 49188257
Centisome position: 98.62
GC content: 34.06
Gene sequence:
>1101_bases ATGAAAGTGTTGCATATGAATGCTGGTGCGGAAGAAGGTGGGGGAAAAACACATATTATTTCACTTTTATCTCAATTTTC AAAGGAAGAAGTGGAATTAATGGTATTTGAAGAAGGTGCGATTGCTAGAGAGGCGAGAAACCTTGGTATTCAAGTACATG TTTTTACCCAATCATCTCGGTACGACCTATCAATTCTTTCAAAAATAAAAGCATTTATTAATGAAAATCAATTTGACATT GTGCATACACATGGCGCACGAGCAAATTTCTATCTCTCCCTCTTGAAAAAAGGTATAAAAGCGAAATGGATAATGACTGT CCACAGTGATCCAACTTTGGATTTTATGAAGAGGGGATTAAAAGGATGGGTATTTACGAAGTTAAATTTACGTTCTTTCA GGAAGGTAGATTTATTCTTTGCAATTACGGAGAACTTTAAGAGAAATATAATAAAACTAGGTGTACCAGAAGAGAAGATT TGTACTGTTTATAATGGAATTGAGTATGATAGTAATCCGGCAAAACCTTATGATAAGAGTGAATTTGGCATCGATGAAGG AATATTTACAGCCATTCAAGTAGCACGTCTTCATCCTGTTAAAGGTCATGATATTTTATTTGAAGCATTACAAAAAATTA AAATTCCCAATATAAAGGTACTCTTGCTTGGTGATGGTCCTATAGAAGCAGAATTAAAAGAGATGGTGAAACAAAAGGGT CTAGAGGATAAAGTAATGTTTCTAGGTTTTCGTATAGATTCAAAGGAATTATATGCGTCTGCACACATTAATTTGTTAAC CTCTTATAGCGAAAGTTTCCCTCTCGTTTTATTAGAAGCGGCTAATCAACGCTTAACATCTATTGCAACAAATGTAGGTG ATATGAAAAAGTTAATAGTTGATGATACGTATGGATGGATTGTACCGATTGGTGATGCAGACTCGTTAGCAAATGCATTA GAAAATGCTTATGAAAAATGGTTGAATGGTGAATTAGAAGCGATGGGAAATCGTTTATATACTCACGCATCTACTCACTT CTCGCTAAAGAATTTGTATGAAGATACTTATAATGCATATAAAACACTTTTACTGAAATAG
Upstream 100 bases:
>100_bases AGTTGACCTGGAAATTGAATGATAGAAAAATAAAAGCTAGCATATGTTAGCTTTTATTTTGTTATAGTAAATAAAAAGAA AAAAATGGGGGATGTAAGAA
Downstream 100 bases:
>100_bases AGAGGATAGTTAATCATGCAAGTAAAAACGGTTGATATTCTAGGTGTTCCTTTTTCTACAATGACAATGGATGAAACAAT CCAATATTTGAAGGGACAAC
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSRYDLSILSKIKAFINENQFDI VHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGLKGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKI CTVYNGIEYDSNPAKPYDKSEFGIDEGIFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG LEDKVMFLGFRIDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIVDDTYGWIVPIGDADSLANAL ENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAYKTLLLK
Sequences:
>Translated_366_residues MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSRYDLSILSKIKAFINENQFDI VHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGLKGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKI CTVYNGIEYDSNPAKPYDKSEFGIDEGIFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG LEDKVMFLGFRIDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIVDDTYGWIVPIGDADSLANAL ENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAYKTLLLK >Mature_366_residues MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSRYDLSILSKIKAFINENQFDI VHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGLKGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKI CTVYNGIEYDSNPAKPYDKSEFGIDEGIFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG LEDKVMFLGFRIDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIVDDTYGWIVPIGDADSLANAL ENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAYKTLLLK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=294, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1788357, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI9755344, Length=249, Percent_Identity=24.0963855421687, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR016040 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41411; Mature: 41411
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSR CEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCEEEEEEECCCC YDLSILSKIKAFINENQFDIVHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGL CCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC KGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKICTVYNGIEYDSNPAKPYDKS CCEEEEEECCCHHHEEEEEEEEHHHHHCCEEEECCCHHHHHHEECCCCCCCCCCCCCCCC EFGIDEGIFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCC LEDKVMFLGFRIDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIV CCCEEEEEEEEECCHHHHHHHHEEEEECCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHHE DDTYGWIVPIGDADSLANALENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAY ECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHH KTLLLK HHHHCC >Mature Secondary Structure MKVLHMNAGAEEGGGKTHIISLLSQFSKEEVELMVFEEGAIAREARNLGIQVHVFTQSSR CEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCEEEEEEECCCC YDLSILSKIKAFINENQFDIVHTHGARANFYLSLLKKGIKAKWIMTVHSDPTLDFMKRGL CCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC KGWVFTKLNLRSFRKVDLFFAITENFKRNIIKLGVPEEKICTVYNGIEYDSNPAKPYDKS CCEEEEEECCCHHHEEEEEEEEHHHHHCCEEEECCCHHHHHHEECCCCCCCCCCCCCCCC EFGIDEGIFTAIQVARLHPVKGHDILFEALQKIKIPNIKVLLLGDGPIEAELKEMVKQKG CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCC LEDKVMFLGFRIDSKELYASAHINLLTSYSESFPLVLLEAANQRLTSIATNVGDMKKLIV CCCEEEEEEEEECCHHHHHHHHEEEEECCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHHE DDTYGWIVPIGDADSLANALENAYEKWLNGELEAMGNRLYTHASTHFSLKNLYEDTYNAY ECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHH KTLLLK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]